Simple sequence repeat (SSR)
| >UN94006 TAACGGAAAAAAGGCGATACAACGGCTTAAAAAACCAAATCACATGTAAACAAACACTCCTATAATAAATTCAATTAATACAACTAGAGCCGCA AATAAATCAAGATTATCTAACATTTGTTGAGTTTTCGCGTTGTACAAAAAGGGCAACAAAACCACAACATAAAAAATCAACCTCTGAGGAGAGC TTCAAGGGCTTCAAAAAACAATGGACCCATTTCAGGGCTTGGAGTTTTGATGGCACACTTGAGTCCCGGAGCACCGATGACTCCTGTAAGTTCA ATTAAGAGCGGGATCCCTTTAGGGATTTTGGCTGAGAGATATAAAACCTCTTGATTCGCGTTCTTACGTTTGGCAACGAAGAACATGTTGGATG AAGCCAACTGCTCTATGGTTGCATCCACATTGTTTATCACAACACCTGGGATCTCCTTTGATACCTCGTTGGAGTCGGGTAATGACTTCCATGT CTCAAGGAAAGTAGGGCGTTCCATTCTTCCATCCTCGGTAAGCAACACAAGTAACGATAATCTATCATTAAAGTACCATACAGGCTGTTGATTG TTCTTCACCGCAATCTGTAAAAGTGAGTTTGGTGGACCTGGTGCTATATTCTGGAACAAGACCATAGGGAGAAGGGTTCTTGATGATGTTCCTG GTTGAATTTGTGGTACCTGAAGTGGTCCAGCAGCTGCAAGACCAAATGTATTCTTGTTGAATTGAATCATGAATCCATCCAGTGGGGTATTTGT GTTGTTCTCGAACATTATACTGTAAAATATCTGACCATCCCTCCTTACCAGTTGCGCACTAATTTCTAGACCTTGACCAGATGCTGCTGGTAAT AGAACTGGCAAAGGGGGCCCTGCAGCCGCTGCAGGCTGATCAGCCGAGACAATAGCATTATCATCACCACCGTCAAGACCCATAAGATCAAGTA AATCTGGCACGGGAGCAGGAGCTGGCTGCTTAGCTGCAGCATTATTGGATGAAGAAGGTGGTGGCGATGCACCATTATCAGCAACCAGTGAAGA TGATGTTTCAGGATACCCTCCTTCAATACCATCGGGAAACTCTTCTTCTGTTGTTTGAACAGTTTTCACACGGGTTATGAATGTCTCAGGGGGT TTGTGGTATACAGAGGATATGGTAGCAATGTTTGCAAGAAGCTCATCCAGGAGGGATGAATCCAATTGATTCGAATCATCACTGATTACCGGCT TCTCAGCTAAAACGACATCTTTAGCAGCCTCAGGGTCAGTTGAAAGAAGGCGCCAATATATGTAAGCACGGTCGCGGAGATCTGGATTATCGGT CTCCACAGTGGCGTTATTCAAAACAACCTGAATCATCTGCTGTGGTCCTTCAGTTGGCTTTTTTAGGAAAAGTTTCACTGTGGCTGTCAATAGC TGCAATTGAACTTGTGCAGGTTCTTCAGGGAAAGTCTCCAGAAAGCTTTCGAGAAGTTCATCAGCATTATCAATTCTTTCAGCATATTCACCAA TTATCCAAATCATAGACGCCTTGGCCTCAGGCTCGTCCAAAGTGTCCAAACTCTCACATAGCGTGGCAATGATTGATTCATAAGTGTTAGGGTA TCTTCTAAAGATATCCTTAATGACTATTATAGCTTCTTGAACAACATAATTTACTTTAATCTTGATCAGCTCTAGAAGAACACTAATGCACCGC TCAGCTGCTCTCTCTAACTTGATAGCACAACGCCCAATAGCGCGAACAGCCTTTCTGACAAAATCTACATCAACTTCTGTAGCATACTCTTTAA ACTCCAACAATACCTGGTCGATATTTCTATCTGAAGCAAGCTTAATCATGATCTCTAGCTTCTCCATTTTCACATAAATTGGATCGTTGTACTT GCAGAAGAACACCTTGATTTCATGAGCAAGGATTGTAGGACGCCTTTGTACAATAAGGTTGATATTCCTTAATGCAACATATTGTATCTCAGGC TCTGCAGAAAGTAATGTTACAAGAGGAGGAGCCATTTTCTTGCATAGGTTCCGAATAACATCAGGACTGGTGATGAGTTCCATTTGTTGAAGGA TCATCTTAACAGCTGAAAGAACAACAGCACAATTTGCATGCTGTAGCCTGGGAGTGACTCTCTCTACAATATTTTCGGCTTCACGCGCATCAGC TGCCTTGTACTTGGAAAGAGCATCTAATATAAAAACTTGGCCCCACTCGGTACATTCATTCAGAGCTGTAAGGAGCTTTGTAAGTGTATTGCTG GTGATCTCTAAGATGGGTTTAGTGCTGTTATCTTGAATTTCTGCAAGAGCTGCGACAGCATTTGCTACCACCATAGGGTTATTGTCAGATATTA AATCCTTAAGAGCATCCAGAAAACCTCTATCTTCAACTAGCTCAGCGTTAATGTCATAAAGTTTGGCGACACATATAGCTGCTGTCTTTCGAAC ATAAGGATCATCATCCTTAAGACACCTCTCAAGAGGATCACAAAGATATTCTGTAATTTTATCAACTCGGATGCACCCCATTGTTCGAACAGCT AAAGCTCGGATCAAAGGATTTGGGTCCTGTGTATCCTTGACAAATGTATTGACTGCGAGTATTGCCAGATCAGGCTGACTTTTAGCATAATTGA TGAGATACAAGTACACAAGCTTTTTGAGCTCCAAATTTTCCGTCTGCATACAGTTCAGGACATCCGTGAATAGTGACGAAACATCCTTCCCTAC AGTCATAGCAGCAATAACCTTTTTAACCGCATCTTTTCTCTTATCCTTGTATTGTGAATTGAGTTCTTCTTTGAGCTCAGGTATTTCACCTTTT TTTGTTGTTGAGAAGTATTTTGAATCGTGTCCGCTCATTTTGATATTGATCTGCCACCGGAGGAGGAGGAGGAGATTACAGGGTGGATGTTTCT TCAAGTGGAGATGTGTTGTCGTTTTGATGTGTGT |
Primers for UN94006 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TGAGCTCCAAATTTTCCGTC | 60.192 | 20 | CGACAACACATCTCCACTTGA | 59.736 | 21 | 279 | 2657 | 2935 |
| 2 | ATTTTGAATCGTGTCCGCTC | 60.081 | 20 | CAAAACGACAACACATCTCCA | 59.6 | 21 | 104 | 2837 | 2940 |
| 3 | TTGAGCTCCAAATTTTCCGT | 59.685 | 20 | CGACAACACATCTCCACTTGA | 59.736 | 21 | 280 | 2656 | 2935 |