Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN93836
AAAATTACTAGTTATCGATTCGCAATCTGTATAAGAATGAGATGGTTTGTAATAGGCATAGATCAAAAAGGAAAAACATGCATCGTCTTCATCA
CTTACTTTATACTTTCAACGTGAAACAACAATGGCTACTACTACAACTACTTCTACGGATCCTCTTCCTCTACCTCTTCGTCTTCATCTTCATC
GTCATCTTCTTCCGCGTCTTCATCTTCATCTTGATCTTCAATTTCATCATCAACTTCAACCAGCCTCCCACAAACCCATCTTCTTCCTTTGCTT
CCTTTTTCCTGTTTCTCACCATCTGCTCCCACTTCCTTCATCTTTAAACTCAAATCACTCCATGATGATGATGTCGACGACGAGGATGATGATG
ATGATAGCTTTACATGATCCATTCCATTCACATTCGTCTGTAAACTCGCCTCACCAACCTTTGCAGTTTCTACAGCTCCATTCACTCCTATTTG
TTTTATCTCACTTGCATCCTCAACTATCTCCTCCTTGTCAGGAACAGCCCCTGCAGATCCACTATTACCCGTCTCTATAGACTTGATATAGCTA
ATAGCTTCAGCAATCAACTTCCTTGTTTCAATTAGAGATGCTTCAGCCATTGGGCTCTTTGCTGCAGCCGCCTCTAACGCCTCTGCAGCTCTCT
GGGCTTCACCAATTAAAATATTGGCTCTTAAAATAGCTTCACTTATTTTGGGATCAGAAGCTGCTCTTTGTGCTCGGATACTCTTTATCATCTC
TAACTTGTATCTAGCTTGTGGGTCCTTAAATCTGGCATGTGGTTGTGGTTCCTTTACAGGACCGCTACTGGTCTTCACCTTAGGCCGTTGACTT
CTCATTCGGGTGTCAAACGAACTTTCTCTCTTCTTCACGGGTTTTTTGGGTTCCTTCTTAATCCCCCATTCTGGATCTCTAGTGTCGGGATCTT
TGCCACGGTGTTTTGCTATCCCACTGTATACCCGATCACGGTATGCAGGGTCAGCCCATTTGGCAGCAATGGCTTCTGAGATTTTCTTTCTTTG
TTCAAGGGTCTTGGGTGCTCTTACTCCTGGGCCAGATCCGCGTTTCTTCCTTCTTGATTCAATACCCTCTCGAAATTCCTTATCAAGTTGCTTG
CTCATTATCTCATAGGAGTTCCACTGAAGCTCTTCCTCACCATAAAGCCCCTTTCTAGAAGCTTCTGCAATCAAGTCAAGCCACTCACGATGGC
AACGGGCTATCATCCTACGGGTGAAACGACGTCTATCCCATGTTTGCCGCACTGCAGCCGCAATCTTTTGTCTTGTTTCACGAGTTTGATTATG
TATTCCCTTCATCAGTTTCTTCTTGACCTCAGGATTACGCATAGCAATCTTGGTTCTCTCACGTATCTTCTGCCGGGTCTCTGGACTATGCTTA
ACACCCTTATTCCACGCCTCCCGTCCTTTATTCGCCTTCGATATCCGATTCCGTCTCAACAACTCCTTCTCATCATAAACTACCTTATCCGTCT
TATCCACCTTATCCTCCCCAACCGAATTCGGCACCTGTTGGATTACCACACTATCATTCTCCTTATCAGAACACAACGGTTCAAGCGTAGCAAC
TGCTTTAATCATCAATCTACCACCGTGGCACACCGGAACCTCGCCATACCACCACTGGAACATTCTCCGGTTACCCGAAAACAATGAAACATTT
TTATTATTATAATGAATTCGGTTTAATCCTATTGAATACAGGTTGTTGTTCCTGAACGAATATTGTACAGTAGCAATATCTAATAAAGGCATGA
GGAGGACATTCAGTCAGGAAATGAGTTGAGTGTGTGAAATTGAGTGTGAAATAGTGTGTGTGAATATGATTGACATGAAAGGTGAATAATAATA
ATAATTAGGGTTTGGTTTTTTACAGGTTGTTGAAGATGAAGATGAAAAGGGGAGATAGCCACACACACA

Primers for UN93836 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GGCATGAGGAGGACATTCAG 60.62220GTGTGTGTGGCTATCTCCCC 60.39520169 17801948
2AGGCATGAGGAGGACATTCA 60.62220GTGTGTGTGGCTATCTCCCC 60.39520170 17791948
3GGCATGAGGAGGACATTCAG 60.62220TGTGTGTGTGGCTATCTCCC 59.55120170 17801949