Simple sequence repeat (SSR)
>UN93428 TTCTGACTTCTTTCTCTTTATGTTTCTTTTCTTTCATAACATTCTCATGAATATTATTATTATTATTAGTATTCTCATCATACTCATTTTCGAA AAAATGATTAGCTTTCATCTTCATTTCATCATCTGCTGCCATGGATTCATGCTGTTTTCGTTGCTGATGTTCGTGCCCGTGCCCGTGTTCGTGT CCGTTTTCTTGCATTTGTTGTACTTGCGGCTGATTCTGATTCTGATTCTGAAAATAACCTCGTACAGCATGAACTTTAAGCGCTATATCACCTC GTATATTCGAAAACAACCCGCGCTTATCTAACGGATACCTTTGCACCATGCTTTCATTTTCGGACAACGGGACACTCGAGCCCGAAATCCTCAC ACGTCCAAGAAAATTCTTATGACCATTATCCCTCCTATCATTAAAAACACTAACTTCAATAGTCGAAAACGACAGTTTTCTCAAATCATCAACT GTGAACACAAGTGTTTCATTCCAACTAGGAAATAAATCCCTAGTTTTGGTCTGCGTACGTTGCCTTTGTCCATCAAACTCCACTTCGACATAAG GGTTCGCAGACCCTTGTCCGTCTTTCGGCATGAGATCGGCCGCATCAATAACTTGTACGACAAGTCTTGCCATATTTTTCCGATGGCCGGAAAT GATAGTAGTGACGTAGAGGTCAAGGGATGAAATAAGTTTGG |
Primers for UN93428 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TGTTTCTTTTCTTTCATAACATTCTCA | 59.638 | 27 | CAGAATCAGCCGCAAGTACA | 60.011 | 20 | 206 | 21 | 226 |
2 | TGTTTCTTTTCTTTCATAACATTCTCA | 59.638 | 27 | AATCAGAATCAGCCGCAAGT | 59.843 | 20 | 209 | 21 | 229 |
3 | TGTTTCTTTTCTTTCATAACATTCTCA | 59.638 | 27 | CAAGAAAACGGACACGAACA | 59.734 | 20 | 179 | 21 | 199 |