Simple sequence repeat (SSR)
>UN93270 ATTAAACCCTTCTAATAATGAAAACTATTGAAACGATTAAAAAGTATACTTGGGGAGAGAATCACAAACTCATAAACAAGATTTCCACTACAAT CAACCACATAAACACGATAAGCATAAATAAGAACCCTCCGACTTCATTCTAAACTAACGATTTTTCAGGACTTGGATTGAGGTAGGGTGTGATG GGGACGGAGTGTGAGTGTGTCTCGTCCTTCATGATCAACCCATATGGCCAAATTCAAGGACCAAAAGCTTCAGTCCCACCACCAATCCCTTAGT AGGGCCGATACCTTCCACGTTTGGAATCTTCATATCCACCACCACCACCACTCCCTCCCCGTCCTCGTGTCCCCCCTGAGCCCTTGCTGCTACT ATGCTCATTCCTCCTAGAAGGCCTCACAGCTGGCATTTGTGCTCCTGGCTGTTGTAGAACATATCCTATCTGACCATCTGGCAGAACCATTGGA ACCATCTGCATACCTCCTGGCACTGGTCCCCTTCCATATATCATTGGCTGCTGAAGCGAAGGGTTAACGCCATATGCAGGAGCAGCCCCATATG GATTTGCTGCAAAGCCACCACCGTAGACAGCATGAGGGATGTAATTTGGAACCGGTGCCGCATGGTGGGGATTAGCTGCATCAGGCTTTTTTTC ACTCTGAGGCTTCGCGAATACCACTTCAAGATACTGACCATCGATTTCACACTGCTTGCTGTAAAATTGGGCCTGAATGCTTATATACCGTCTA ATGATGTTAAGATTTCATTAGCTCATTGTTAGCCAGATTCTAGATCTTCAGAAGGTCCAGTTGCTGGGCTAGATCCATGTTA |
Primers for UN93270 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AACCCATATGGCCAAATTCA | 60.016 | 20 | CTACAACAGCCAGGAGCACA | 60.049 | 20 | 209 | 225 | 433 |
2 | ACCCATATGGCCAAATTCAA | 60.016 | 20 | CTACAACAGCCAGGAGCACA | 60.049 | 20 | 208 | 226 | 433 |
3 | ACCCATATGGCCAAATTCAA | 60.016 | 20 | CCAGGAGGTATGCAGATGGT | 59.95 | 20 | 265 | 226 | 490 |