Simple sequence repeat (SSR)
>UN05403 ATTCAATGTCTTGCGCTGTTATATGCATCTAGGGTTTATATACTTAACCATAGATATACGATAATTCGTTCGATCAATAATCAATTTACCTTAT CGCAAAATTGATTTTGATCGATGATGATGGAATAAATTAGTTAATCGGCCCCAAGCTCAAAGCAGAAACAACATCAAGCCTCCATGCAAATCCA CCACCAGAATCCATAGCACAAACATCACAAGGCACAATCATCCACATCTTCTTTTCGGCATACTCAACCCTAACACTGCATGAAAAAGCTGGTA AATATTTCACAACAACAGATCTATCAACTTTCAAAACTAACCACACCGCCACGTCACCACCATCACCACAATTCAGATCTAACAACCTCTTATA AGCCTGGTTCACCCAAACCACCTCATTGAAGCTATTCGAAACGAAACAAGGACACGTGTCGCCTTCCAAATTCTTCCATATCTCCTCATCACTA TAACCTAAGAGTTTTCCACCATCGCACGTACCAGTAACCGCTTCAACCGTTATCCACGACTCCGTCACGGTCCGTCGTTCAACCGCTGTACCTA CCTCTCCACCATGCAGATCTGACGTCATCATCTCTATTGAACCACTTTCAACGCTCTCAAACTCATTTCCACCAAAACTGATCCAGTTAGTTAC CTTTTCTGACGGATCTGTTATATTTCCGTTACACTCATCCATATCGTACCAGTTTTTGTTATTATTATTATTATTATTATTATCCACAACTTTA CTATTATTCTTCACTTGTTTACGAACATACTTACGCTTAGCTCTCTTTCTGTTAACAAGACCTTCACTCGCCGGAAAAGACTGCCCGGAGCCTT CCGCGTTGACCGGACGTGGAGCGATCGGACGGTACCTGAGCATAATCTGATCGAGAATCATGTTATTCTCGCGACTGACATCCACGCGCCTCTT ACCAGTATCCATCACAGGTACGTTATCTAATGATCATATAGTTAGATGTTCCGAAAATACGACCGGATAATGAAGGATTTTGATTATGAACATG TAACTAATGTCGCCGGTGCGTGTGAAGTACACGTGTCTAGGGCAAGTAATGAATGAAAGGTTGTGATTGGTTGTTGGTGATATTTGGTGGGGTC CACAGAGTTATGTGATGTGATTGGATTGCTATAGGTGGAAGGACACGT |
Primers for UN05403 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CGCTCTCAAACTCATTTCCA | 58.999 | 20 | TTATGCTCAGGTACCGTCCG | 61.041 | 20 | 276 | 616 | 891 |
2 | TTTCCACCAAAACTGATCCA | 58.947 | 20 | TTATGCTCAGGTACCGTCCG | 61.041 | 20 | 262 | 630 | 891 |
3 | CGCTCTCAAACTCATTTCCAC | 59.867 | 21 | TTATGCTCAGGTACCGTCCG | 61.041 | 20 | 276 | 616 | 891 |