Simple sequence repeat (SSR)
| >UN93180 CAGAGAATGTGGGTGCTTTATATATATCACAATAGGAGGTCAAACGATGAACCTCTGTTACATGCTATTTTCGATTTGTTAATATTCTAATTTT ACGATTCATTTAGATAGGCGAGAAACATTACTATACCTTTTCACAAGTAGTAGTTTACATACAACTTGACCAATTAAAGAATGACACCCACTAA AGCACGCAAATATAACCAGTAGGTGAATGATGATGATGATGATTCACGAATCCTTCAATGTTATGGGAGGTAGAGTGCAAACATCAAGAGGTGA AAGCAAAAATTCTATCTGCAATTATGGTCCGGCAAATTGGACACTCGGAACATGCAACTGAACAGGATTTACACATACAAAAATGTCGACAAGG AAGAAGCATTGTTGTAGTTGGTGACTCGAAACATACTTTACATACATGAGAATTTGCATCACTATCCACATTGTAATTTAGCTCTTTCTCCTTC ATCTCTTGCAGTCGTGCCCTTAAACGAGCAACAAGGGGCTCTTCCTTTGGCACGTCATGAGCTAATTCCTGAACATCAAGGATGACTTGCCTTT CTTTTATAACTGAATTATCAAAATCACCATTATCTAGTCTTGGTGCATTCACATTTTCATTTCTCTCAGCATGATCTTCCTTATTAGTATTTAA CTCAGGGACCTTATTACCCCCTGCCTCTTTCTTCAGCTGAGCAACAAGAACCCACATGTTTGCTAAATCATTTTCCAAAGATGCCTCCTTTTTC TTTGCATCTTCAAGTTTTTTCCTATATTCCTCTTCAAAAACTTCTTTCTCGGATAAAGCTGCCTCAAGCCTCGATTCACGTTGTTTTCTTGCTT GTAACTCCATTCTTAAATCTTCTGGGTCAAGATTCCATGAGTCAAACTCATCATACGCATTGTTTACTCGACCAGAGGACCGTCCTTTTCGACC TGGTTTTCCGCCATCAAACTTGCGGTTACCACCATTTGAGGCTTTTGAGTTTGCCAGCTCACATGCAGCCACTAACTCTTTCTCAAGTCTTGCG TTCTCTAGGGAAAGTTTAGTGACTTCACCGGCTAAATTCTTGAGTTCAACAGCAGCAGCAGATGCCAGTTCCTTTGCGTAAGAGGCTTCTTCTG ATAGTTTCTGATTCTGTACATATAATCCACTGTTCTCTTCTGAAATGTGAACATGCTGTAGCTTTAGCTTTTCATTCTCCACCTCCTGTATTTT GATTTTAGTCCTTAGCCCATCAATGTACTCTTTGGATCCATGCTGTTCTGAAGAGGTCATTGGCTTCTGATTAGCCATAGCCAGCTGTTGTTCA AGCAGCATGATTCTCTCTTGGAGTTCTTTGTTTTCTTCACACTTGTTTTGCAATTCTTCCTGGAGTATACGGTTATCTGCTGACCTGATCTCAA GCTCAAAACCCTTTTCATCAATCTGTGTCATCAGTTGCATCATTGTCTGCTGCATATCAGCCAAAGATGTATTAGAAATTGAAGCTTCGTTGCT TTCAACAATCTGTTTCTCCAAGTCCCTCATCTGCCTTCTTTTATCTTCTATCTCACGCTCCAGGTCTTCTATTTGGGTTTTAGAGTTCTCAGGA TCATTTGCAGATTGCTCCACTAAGCGCTTCATGGTACTTGTACTGAATGCAATCTCTCCCGCAAGCATCTTCACTCTCTCCACTAAAAGGTCCA TCTCATCTATAGAGAGTCCACCTGTTAGCCGCTTCACATCACTGGCAGAACCACTAATGACTTCACCCGCATGAGTAGAGTCGGTAATAGTGCT ACCCACATTGCTGGATATTAAGTCATTCTGAATGTCACCATTCAAGAGCAGAGAACCATTCTGCATCATCATTGCCAGGAATTGCATTCTTTGA AGAAACAAGAATTAGCTTTGTTAGCCTCTGAATCCTGCTCATGAGAGCAGCCTTGGCTTCTTCCTCTTCCTCTAAGCGTGACTGCATCTTCACT TGTCCTTCTTCTAGCTTTTGTTTTAAGGACATTATTTCTTCTGGATTGACACCTACAAGCATTCCCCTTCGTAATTGCTCAAGCTCCAGTTTTA GAGCTGATATCTCTCTCTGGTACTTCTTAATCAGAGATTTTTCGTCAATAATCTTATTCTGAGAGGCATAGATTTCGATGCGCTTCGCCCTACT TGCAAATTTTAATGTATTATGAGTTTCCTCCATACTGCTGGATGCTGGAGTTATGGTGCAGATAAGTGAAACATGGCCATGGCCACTCAATGAA GACTGTAGAATACGGGTAAGCTTGGAATCTCTGTAAGGAACATGAGATGCTCTTCCCTCGCTAAGCTTTCCAATAACAGTTCCAAGGGTTAGAA GACTTTTGTTTATATAAGATCCTTCTTTCCTCCTCAACCCAGTTGTTTCAGTTTTTGAGCTCTCTGATCCCGCTAAATCAATAAGATTAAGTTG AGAAAATATGACTCCGTCATATTCGTCACCATGAGAGCTGCTTTCAATCATCAGGGTAAATATTGTGTGACTACGGCTGCTAAGAAGGTTGAAG TTATTAGAACCGATGTGTCGGTGCTCTTCACCGGCAGCAATGAAAGAAAGGGCATGTCCAGGAGATAAAACCACCTCTTCCTTTATACCTTCAA CATATGTACCCTGAGCATCTTCTCGAACACGGAGATTCTGTCCTGTTGGATCCAGCAGATCATTTATGACCTCGTTATATATCTCAATATATGA CACTCGTAGTAAGAATTCCCTTCCTGGCGTATCCTGTATAATGCTGAAAACATCCTTTATTGCCAAAGGTATTATTCCTGGAGAATTATGATCT CCATGCATAGTATGCGTCTTTCCACTACTTGTAACACCATAAGCAAATACCGTCCCGTTTATTCCTTCCATAGCAGCTTTTATAACAGGTCCAG CAGCCACATCGTACACTTCCTGAGTCTCCGAATACTCTCCAAAAACTTTATCAAATGCATAAGACGTAGCCGGATTATACTCATTCCGCACAAG CTTATCCCCGTCCGCATACCACGCCACCTCGTCTCCTCTCTGATACTCCCGTTCACTCAACGGCCGAAACCTAATCGTAACAGAAATACTATCA CCACCAGCAGAAGGTCTCGCCACGTCATCAACCATCTCATCAGCACTCTGATACTCACCACCACCGCCATAACCTCCATAACCACCTTGACTCG AATAGACCGAATCAGACATAGTTCGATTCAAGTTGGTCAAATTATCAGATCTCGAACCGTAACCGCTAGATCTATTCACAAACGA |
Primers for UN93180 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ACCCACTAAAGCACGCAAAT | 59.637 | 20 | CCTGTTCAGTTGCATGTTCC | 59.139 | 20 | 169 | 180 | 348 |
| 2 | AATGACACCCACTAAAGCACG | 60.045 | 21 | CAGTTGCATGTTCCGAGTGT | 59.751 | 20 | 169 | 174 | 342 |
| 3 | ACCCACTAAAGCACGCAAAT | 59.637 | 20 | GCATGTTCCGAGTGTCCAAT | 60.935 | 20 | 158 | 180 | 337 |