Simple sequence repeat (SSR)
>UN91765 GGCGAACACCAAATGTAAGTTTATATAGACGGGCATTAGACCAAGTCTTTTACATATACAAAACTTAAATGACCAAACCAAACACACTAGACAA AATCTTCTTCCCTCCCATAAACAACACCGTTCAATGAGAATTGCAACAACATAAACGAAAACCATGTAAATACGAGCTTCACAAGTGCTAATAA CTACTACCCGGAAATCCATGTCATCCGTGGCAAATATACAGGTAGAGATCTCATTCTCACCTCAGAAGATAAAGAGCAATCAAGGATGCAACAA GAACAAAGCTCGATCTCAGACCTTTAGAACCATTTCCCGAAGGGCTGCCATTGTTACCCGCTGGGCAAGTAGTAGAGATGGTGCCATTTCTGTA ACCGTCATACGCACATCTTGAAAGGTTACAATTAGAATCGGAAGTGCTGTTGCCCAAATCAAATGATGTGCCTGCGCATTGTGTAGAAGGACAA GTTTGCGTGTTTGGTAAACTGATTCCTGATGGTTCACATTGCAATACCCAATTGTTAGCAGCATTGCATTGGCATCTGACGCAGTTGTTAGCAG TAAGAGTGTAAGTGCCATTTGGGACGAGCAAAGGGTAGTCCACTGAGTAGTTCCTCACACTGGTTGTACAAACTTTCAAAGGAACATCAAGAAC AGAATCGGCTTTCAAGTCCTTAGCATCTTTTATCCCATTCAACTCCAACAAAACATTTTCCGTCGTATTAAACTGATTCGCAATCCCAGCTACA CTACTTCCAGCAGGCACATAATATCCATAATGCAACACTTGCTCTCCACCAACTTGATCACAGCTACAAGGCAAAGGCACCCACAGCTCTTGTC CCACTGATATCTCATCAGCATTAGTTATATTATTTATAGCCTGTATCTGTTGGTACGTCACTAGTCTACTAAAAACCTCAGCTGCAATATGGAA CAGCCCGTCGTTCGGGACCACTGTGTATATTGGTCTGCGGTTGGATATGCCTGTACCATTGTTGCAAAAACATGGGAATGGGATTTTCAACGTT GATGTAGCTGGGTAAGTTTGGTTTTGTGGGGTGTTTAAAGGAAGATTATTAGCGGCTAAAAGTGTCCTAAGGTTTTTGATTTGGAAAAGTGCAC GGACTGAGGATAAAGTAGTAGTGTTTGGGAGCTTGTAGTCTATTAAGGAGTTACACGTGGCACCTCTGGTTGTGCATGTGAAGCCTATTGATGG TGGTTGGGAAGATGTTGGTTGGATTATGGTGAAGATGGAACATAAGAGGATTAAGGTTGGGATGAGTGTGGGAAAGTGTTGTTGTTTTTCCATG ATTTTGGTTTTTGTGTGTGTGTGTGGAAGTTGGTTGTCCACGTTTACAAGTTAGTTTATATGGCGC |
Primers for UN91765 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATTTGGAAAAGTGCACGGAC | 59.978 | 20 | CTTGTAAACGTGGACAACCAA | 58.591 | 21 | 254 | 1113 | 1366 |
2 | ATTTGGAAAAGTGCACGGAC | 59.978 | 20 | TTGTAAACGTGGACAACCAA | 57.509 | 20 | 253 | 1113 | 1365 |
3 | ATTTGGAAAAGTGCACGGAC | 59.978 | 20 | ACTTGTAAACGTGGACAACCAA | 59.443 | 22 | 255 | 1113 | 1367 |