Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN91748
CTAGACTCATCATCAAAAAGCAATCTGATTTCTATAAGTAACATCGCCATGCCCAACATTCTTACATTACCATCTGTTGCCAGGTGGTTTAACT
TTGTAAATCCTAACTATCCAGTTTGATGTTGTGAATGCTTCTTCTAAGTATTCAAGTTTGACATCCTTATTCCCTATCTCAACGCCTCTCGCTC
GGTCATAACCAGGAGGTTTTCCATACTCTGTCGTCAGCTCCCCAAACCGATAGTAGCATAGCTTGTACATTAGACAATTCAACATCTTGGGAGC
TGCTCCTTTGTCAACACGATATTCACCATTGACAAGATAATCAGGTTCCTTGATCACAGGGAAAACTCCACCTCCAATTCTCACCATCCACAAA
AACTTGTTAATATCATCTGAAGAGTAGCCAGTAACACCTCCAAAAACAACCAACACATAGTCCACATCCAATGATCTCATTATATCATATGCTT
CGTCCTCATAAGAGGACATAGCCCGCCCGACTGTAGCAATGTGTGTATTATTCCATGTGTTATTGTCTACAATAACAGTTCTGTTCCCCATGGC
TGTAATTTGATAACCATAATCCCACCAAGACATTACTTTAGCATCTTGAGGAGTATTTTGTCTAAGCCAGAAGTATGCTTCACGGTAATCATCA
AATATGACCCGTTGACCATGGGCCCCACGTGCAGCCAAGACAATTGAAGGAGATGAGTATGCCTCTGATGTGACCCATGTACAGTGAATAGCAT
ATCTGCTTAGTAAATAGAAAGCACCAAAGAGTAACACCGTAGCACCATTTTTCAGGAAAGGAATAGATTGGTCAAGCGAAGCTTGTTGCTTAGA
TAATCCCTTTGTGCTACTGGTTCCTTTGGCAGAAACAGTTTGACCAGTCTTTCCCCTGATCGCTTGGGTCAAGTTCTTTATTGTAGCAGAGACT
GCAATAGCACTAATAAGGCATACGGCAGGTGTTGCAACAAGAATCAACCGAACCATCACACCAGCGAAATACATACTCGTGAGACCGTACATTA
CAATGAAAATAGTGGCATCTGATAGTCGTTTGAAGCAGAAATATAAACCCGCGGGAAAGAGGAAAAGCAGGATATGAAAATCAAACATGAAAGA
TGACCATGCCGTAGGCTGATGCTCAGAGACCGAAGCTATAATTGGGATATGATCTTTTGCATACGTCGGGTCCAGTAAAGAGTAAAATCGCCCT
GTCCATGGTGAGATATAACCAGAAGCTGTACCCAATCCCAAAGCAATAGCACCCACAGCTACTGCAGATGTTACACTAATCCTCAAAAAGGCTT
GAAACTTGGTTGTATCGTTTAACATGTGCTTTACCCAAACCAGGAAGTAAAATACCTGAATCAAGAAGAACACTCCCATAGCAGCCATATGTTC
ACCCGACTGAACATGTTGAAACCCAACAAACCTAATCTGCATAGCGAGCAACATCCCCACAATATACATACAATTATACGCCACATACAATCTC
ATCGAATACCTCCCAGTAATCAGCAACACCAACACATACAACGGAATCAAATTAATAATAAACACATAACCACCCCACGCCGAAACCATATAAA
AATACCCAAAAGCCGACGCTAAACTCCACGCCAACGACCCCGTATTAACCGCCTTAACAAACAAATAAAAAGTCAACAACAACGCAAAAATCGC
AACACCCTCATTATCATAACTCCCTGCAACCGACCTCGATATATAACCAGGACATATAGCAATCAAAATAGCAGCCACTAAACCCGCCCCAGAA
TCCCACACCTCTTTCCCGAAGAAATACGCCACAATTGTCGTATTACTCGCGAAAAAAGGCGCAGTCAAGACACAAACTTCGCGAATATGAACCG
CAAACCTTAAAAACTTCAAACCCCAATAAATAACAGCAGCAGTAACCATAAGACCAGGATACAAAGTCCCACCTATAATTCTACCTAAAGGGTA
CCAGCTTTCGGAATCGAACCAGTTCCAAAACTCGTAAAACCCGTTTTCGGTTAAGTACAAGGTGGTTCTGTAGTTAAAATAAGGGTCAAATTCA
TGTATCATAGACTCATAACGTAAGACACTAAACAAACGAGTAATAAAAGCTAAAATGTAGACAAGTAACAGGATTGTGATACGGATCAAGAGTT
CTTGCTGTTTGGTTTTGAGTTTGAAGGTTTTTAAGGAAAAAGGTGGTGTTTTTAAGGCTGTGGTTGGATCTGGTTGGTGGGTTTTGTTGGTGTC
TGGTTTTCCGACCATGGTTAATGATGATGATGATGGAGATCAATGGTGGTTGTTAGGGTTTGATGGAAATGACAGAATAGAGTGGACTGAAGAG
A

Primers for UN91748 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1TGTTTTTAAGGCTGTGGTTGG 60.01821TCTGTCATTTCCATCAAACCC 59.78221124 22092332
2TGTGGTTGGATCTGGTTGGT 61.23820TCTGTCATTTCCATCAAACCC 59.78221112 22212332
3GTGGTTGGATCTGGTTGGTG 61.23820TCTGTCATTTCCATCAAACCC 59.78221111 22222332