Simple sequence repeat (SSR)
>UN91561 TATGCCAGCTTAATACATAAAATTAGATTCACCACACAAATGGTTGGCAGTCACCGTATTTTAAGTTAGAGCATAGTTTTGGTCATAATAAATG CAACATTTTAAGATGATTTTCCCATGTGGTTCAATAAGCTTCACAGACCAAAGCACACAAAAAACATCAGATTTTCATTTCACCCTTTATACCT AATTTTTAAGATGGAAGCCATGGTGTCCATGAAAATGTGTACTTGATCATGAAAAAGAATAAGATATCAGGGGACAACTACCGTGGTGTCCGCC ACCCAAACTGCAACAGAGTTCTGATAATATGAGCATCCCAAAAGCTTCCCATCGTCTATGCAAAGGTCGCCCAATGTTGACCATCCCATATCAA GAGCATCATGGCAAATAACAGGCTCCCATGAATAGACCTTTAAACTGCTGTCTAACCCGGAAAATAGAGTTCTCCCATCAGGGTGAAAAGTAAC TGACCGTACGCCTGAAGCCTCTGGTCGAGTTGATCCAATCAATTCAAAGGTCTCCAAATCCCAAAATTTTACAGTTTTGTCTGATGAACCTGTT GCTAGAAGACACTCGAGAGGATGAAAATCCATTGACCTAATGTGTCCTTCATGAAATTTGAACTCATGTAAAAGCTTTCCAGCTGTTAAGTCCC ATATCTTTACAACATTATCAAGTCCCCCTGATACCACCCAACGACCATCAGGACTGAATCTAATAGTACTAACTGCTCGTCTGTGTCCTTTATA TGTCTGAATGCACCCTTTCTTTCTGATGTCCCAGATTTTTAGATTAGTGTCCATGGAACCCGATGCAAAAAACTCACCAAACGGATGAAACTCA AGAGAAGTGCAATACGATCGGTGTCCATTAAATGCACGAACAACCTTTGTCTCTTCCAGGTCCCAAAGCTTTATCAAGCCAGAAGAAGCTCCAG CAGCCACTAAAACTTCTTTCGAGTCAAAAGCTACAGATTCAATAGGGCTTGTGTGACCGCTTAAGCTCGTTATAGGGGTGGGTTTGCCAATAGA CCAAAGATTAAGTTTTTCATCATCACCACCAGTAATGAAATTTCGCCGACTCTTTTTCCCGAATCTTAAGCAATTCACATTCGCAGTATGCGCC ACAAATTCCTGTAGTTTATATCCTCGTTTCTCCATGTTGATCTCAGAATAAATGAGGAGCTCTTTTTGAGGTGTCGGTGATGACGTGGCAGTTG AAAATTTGGAAATGAAGATGAAGATGAAAACACGCACAGTTAATGTGTGTGTGTGTGTGAATGATTGAAATGTTTGTTTGTGTGTTGCAGAAGG TTTGGTTTATTTGTTGTTGTTTATGTTTGTGTGTCTGTGTTTTACTGTGTGTGTGTGTGAGAGAGAAAAAGAAAGTTTTGTAGAGAAAGAAATG AAAAGAGAGCGTT |
Primers for UN91561 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTTTGAGGTGTCGGTGATGA | 60.088 | 20 | CGCTCTCTTTTCATTTCTTTCTC | 58.835 | 23 | 230 | 1192 | 1421 |
2 | TTTTGAGGTGTCGGTGATGA | 60.088 | 20 | CGCTCTCTTTTCATTTCTTTCTCT | 59.705 | 24 | 230 | 1192 | 1421 |
3 | GATGACGTGGCAGTTGAAAA | 59.697 | 20 | CGCTCTCTTTTCATTTCTTTCTC | 58.835 | 23 | 215 | 1207 | 1421 |