Simple sequence repeat (SSR)
>UN91232 CGGGGAGCTATGTGAAAATTGACACGAAGCATCAGTAAAAACATTCAAAATGTACCAGGAACATACTACATCTCATGTAACCCCTCCCACGATA ACATGCTTCTTTGTTGTCGAATATGCCAATTGATTCTCTCTTCTAGATGTGTTTTGAACATTACATGAGATGAATGGAAGATGGGCCCGTAAAT GCAGCAACTTTCTGAGCTTGATGAGATTCAGACTTGTATAACTCCTTCAGATCCTTTTTAGCACGCCGTGCCTCTCGTTTTTCCTCCTTCACAG CAGCCTTTCGCTCTTTCTTTTCTTCCTTTGATTCTGCACCAACTTTCTTCTTTGGCTGCTGCACATCTTTCGGTTTACTATTATCTTTCACAGC TTCAGTAGCAGAGGTCCTACTGTGGGGCAAAAAGTCAACCGGAAGCTTTTCTTTTCCTTTAAGAGCAATTACATGAGTGGGAGCTGTGAAGGCC TTGTTGACTGTTTCTGTCAATTTCTTTTTTCTCCTTCCTCCCGGGGCTTCGATCTTCCCAGGGTGGTTATCAAGATTTGAATAAGTAGTTATAA TAGTCTCACAATCCCAACCTTCAGATTCATCACTGCTTTCCTCTATAAAAACATCTTCTTTGTCATTTTCATTTTCAAACTGTTCAGCATACTG TATGCACCGAGGTCTCAGATCAGCAGCAGTTTCCAGTGAAATTGGCTCTTCTTCTTCTTCTGCATTCTTGTCATGCAATAAAACTTTATATTTT CCATCCATTTCTATTGTTTTAATTGCATCTTCTAATGATGTGTCATTGAGCTTCACTGCAAGCGAGTCACGATACTCGTAATCTTCTGATGTGG CTTTTTCATACTCATCTTCACTATCTGTACCATATTCCTGAAGTTCAAGCAAATCAAACTGTTCATCTAACGGTCGGCGTTCCCTAGGCTTTGC ACCAACAAGATTGCGGTTTCCGCCTTCATTTATGTTATCTTGTGAGTAATATGTATTGTATTCCTCTTCATTGTTGTTCACATTTGAATGTTCT GCCAAAGTCGGCATCTTATTAAGTTCTAAGTCTTCTGATTCGTCTGGAAGGTTAGCATTAAGAACAAAATCTTCTTCCAAGTCCTCAACATCTG AACCAAAGCGCGAATTATCACTATCATCTAACAATGCAGCTACTTCAGGATCAATTGCTTTTTGAATCCTCACAGGAACAGTTTTCACTGCAAC ACCATAGATTTTGTTCTTGTAGGATTCTTCATCATCCGCCTTAGAAACCTCAATCCTGGATGCATCATATGCCTTAACATCACTAGGCAACTGC TCAAACTTGGCTTTAGGATTATGATAAAACTCAGAAGCAGCTTTAATCTCCCTCAAATGAGACAAATAGTTATACCCATCATCAGGAAACCCCA GCTCAACAATCTCCCTCCTCACTTCATCAGGCAAATTCGACCCACCACCACCAGGCAACCTTGGTCTACTGGGCCCACCTTCTTCAGGGGCATC ATCGAATATCCCGTCCCCGTCGCTGTCAACGTCGTCGAAGAAAGGTGCTTCTGAGTTGTTGTCTACTCTAACGAAGACACGGTCGTTGGATGGG TCTTCGGTGTAAAGTGGGTCGGAGGTGTCGCGTGAGATGAGTTGGAAAGTGGCTGATTTTTTCTTGTCTATGAATTTCTTCTTTTTTCCCATTT TTGGTTTTTG |
Primers for UN91232 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CAGATCAGCAGCAGTTTCCA | 60.136 | 20 | AATCTTGTTGGTGCAAAGCC | 60.118 | 20 | 279 | 674 | 952 |
2 | CAGCAGCAGTTTCCAGTGAA | 60.175 | 20 | AATCTTGTTGGTGCAAAGCC | 60.118 | 20 | 274 | 679 | 952 |
3 | CAGATCAGCAGCAGTTTCCA | 60.136 | 20 | ATCTTGTTGGTGCAAAGCCT | 59.74 | 20 | 278 | 674 | 951 |