Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN91199
CGCTTCAAAAGCCGAAGTATCGACTTTCTGATCATCCTTGGAAGCTTCATAGTTACAAATCTTCCTAGACTCCTTGTGAAGTCTCAAAATGTGA
GTATCAAATCCATGGCTCTTATAAAAAAAAAAAACTCGTTGCAAGAAAATTTTGAATGTTTCGAGATCTTATCGAAGCACATACTGGACCAGCT
CGAGAGTTCCATCACCTCATCTTGCCTTCAGGTTCCCTAAATGCTTTTTCCAATTTAGTTTCAACCAAATTTCTTGCATCAATCTGTGTTTCTA
TCTCCATTTTCAGATCGGTAATTCCAGCGGGGAGTATTTATCAAAATGAGATCTTTTATAATCCAAATGCCATCCATCTCCCATGTAAATTTTC
ACTTGTGCATATAATCTGTTATAAGCTTCTCTATTTCTTGTCTTTTTTTATCCATCTAATAGCCTGGTCAGGCTTTACTCACTTTGCTCTTCTG
TATATGTTTACTCCTACATTATATATATATACTAAAACACATTCCGTTTCACTGTAGCTACAGTGCACACACAACTTTCAGCTTTGGCACTTTT
AGCCCCTGAGGTTACTGCTCAATTGCAAAGTTAGTCCTTAACGTCCGTTAACTAACATTTGAGGATTAAATTTGAAACGCAACAATAACTTGAG
GGGCTATTTCTGTGCAAATATTAAGCAAAAACAGCCCCTGAGGTTACACTTTTTTTCACCGTTAGTCCCTAAGGACTAACGTTGCAACAGCCCG
TTAGTTTCAGGGACTAAAAATGAAAATTCCACTGCTACAGTGCAAAACAGTGTTTGCTACAGTGCACGCATAGTTTGGAATAGTGCGCATACTG
TTCAT

Primers for UN91199 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1CCAGCGGGGAGTATTTATCA 59.91620GGCTAAAAGTGCCAAAGCTG 60.01820263 306568
2CCAGCGGGGAGTATTTATCA 59.91620TGCCAAAGCTGAAAGTTGTG 60.02720254 306559
3AATTCCAGCGGGGAGTATTT 59.79920GGCTAAAAGTGCCAAAGCTG 60.01820267 302568