Simple sequence repeat (SSR)
>UN91199 CGCTTCAAAAGCCGAAGTATCGACTTTCTGATCATCCTTGGAAGCTTCATAGTTACAAATCTTCCTAGACTCCTTGTGAAGTCTCAAAATGTGA GTATCAAATCCATGGCTCTTATAAAAAAAAAAAACTCGTTGCAAGAAAATTTTGAATGTTTCGAGATCTTATCGAAGCACATACTGGACCAGCT CGAGAGTTCCATCACCTCATCTTGCCTTCAGGTTCCCTAAATGCTTTTTCCAATTTAGTTTCAACCAAATTTCTTGCATCAATCTGTGTTTCTA TCTCCATTTTCAGATCGGTAATTCCAGCGGGGAGTATTTATCAAAATGAGATCTTTTATAATCCAAATGCCATCCATCTCCCATGTAAATTTTC ACTTGTGCATATAATCTGTTATAAGCTTCTCTATTTCTTGTCTTTTTTTATCCATCTAATAGCCTGGTCAGGCTTTACTCACTTTGCTCTTCTG TATATGTTTACTCCTACATTATATATATATACTAAAACACATTCCGTTTCACTGTAGCTACAGTGCACACACAACTTTCAGCTTTGGCACTTTT AGCCCCTGAGGTTACTGCTCAATTGCAAAGTTAGTCCTTAACGTCCGTTAACTAACATTTGAGGATTAAATTTGAAACGCAACAATAACTTGAG GGGCTATTTCTGTGCAAATATTAAGCAAAAACAGCCCCTGAGGTTACACTTTTTTTCACCGTTAGTCCCTAAGGACTAACGTTGCAACAGCCCG TTAGTTTCAGGGACTAAAAATGAAAATTCCACTGCTACAGTGCAAAACAGTGTTTGCTACAGTGCACGCATAGTTTGGAATAGTGCGCATACTG TTCAT |
Primers for UN91199 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCAGCGGGGAGTATTTATCA | 59.916 | 20 | GGCTAAAAGTGCCAAAGCTG | 60.018 | 20 | 263 | 306 | 568 |
2 | CCAGCGGGGAGTATTTATCA | 59.916 | 20 | TGCCAAAGCTGAAAGTTGTG | 60.027 | 20 | 254 | 306 | 559 |
3 | AATTCCAGCGGGGAGTATTT | 59.799 | 20 | GGCTAAAAGTGCCAAAGCTG | 60.018 | 20 | 267 | 302 | 568 |