Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN91196
CTCCTCCTCCACCATCCTATCCCATTCTTGTGAAGTCTCAAAATGTGAGTATCAAATCCATGGCTCTTATAAAAAAAAAAAACTCGTTGCAAGA
AAATTTTGAATGTTTCGAGATCTTATCGAAGCACATACTGGACCAGCTCGAGAGTTCCATCACCTCATCTTGCCTTCAGGTTCCCTAAATGCTT
TTTCCAATTTAGTTTCAACCAAATTTCTTGCATCAATCTGTGTTTCTATCTCCATTTTCAGATCGGTAATTCCAGCGGGGAGTATTTATCAAAA
TGAGATCTTTTATAATCCAAATGCCATCCATCTCCCATGTAAATTTTCACCTCTATTCCGATCTCATTCAGCATCTTTAGAGTTACCTGAGACA
CCTATAAAAATAATTCAAAACTAACTCCTGTTCATTTATTCCCTCTAACATTTAAGTAAATCTGCCCTGGCGGGATTGGGTTCGTTGTTGTTGT
TGTTGTT
GGTTTTGACCCATGACCCGATAGCCTACCTCATTCGGTCCACTGTGGAGTGGATCATGACTACTCCAGCAAGAGCTGTGTATACATG
AACACCACTGCTGCGCTCGCTGGTAATAAGCATAAAAAAAAACCGACTGAAAGGGCATATCTCCCCATCAAAATCCTCCTTTTCACCTCTTTTT
TCACTTGAGCTTCAAGCTTATGCCTGTCCTTGGTTGGTCTTGAAGAAGGATATGGAGGTCTTTGGTTATCTACATAACAAAATCTTTACCTGCT
ACTTGAACTAAGCATAAACAAAGAGCCTTTACACATGTGAAAGCTCCGATTCGATTCAGTTTTCATGTTGTTCAATGCTATTGCAGGCCTGGTT
GGTGTACTTTGCACCTGAAGCATTACGTAGTTTCCAAGTTCGCTACAAACAGAAAATAGATTATGTGAGCAGTTAGTTGTCCACGTCGAAGTCT
TAAAACGCACCATCTTAACTGATTCCCCAAACGTTAATCGAACCAACGTAATTCTTGGTCTAAACATCTCATATTGCGAGTAATGTC

Primers for UN91196 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1TAAGTAAATCTGCCCTGGCG 60.22320ATGGGGAGATATGCCCTTTC 60.11720204 429632
2TAAGTAAATCTGCCCTGGCG 60.22320AAAGGAGGATTTTGATGGGG 60.12420218 429646
3CCAGCGGGGAGTATTTATCA 59.91620CGAATGAGGTAGGCTATCGG 59.68520254 260513