Simple sequence repeat (SSR)
>UN91180 CGCTTCAAAAGCCGAAGTATCGACTTTCTGATCATCCTTGGAAGCTTCATAGTTACAAATCTTCCTAGACTCCTTGTGAAGTCTCAAAATGTGA GTATCAAATCCATGGCTCTTATAAAAAAAAAAAACTCGTTGCAAGAAAATTTTGAATGTTTCGAGATCTTATCGAAGCACATACTGGACCAGCT CGAGAGTTCCATCACCTCATCTTGCCTTCAGGTTCCCTAAATGCTTTTTCCAATTTAGTTTCAACCAAATTTCTTGCATCAATCTGTGTTTCTA TCTCCATTTTCAGATCGGTAATTCCAGCGGGGAGTATTTATCAAAATGAGATCTTTTATAATCCAAATGCCATCCATCTCCCATGTAAATTTTC ACCTCTATTCCGATCTCATTCAGCATCTTTAGAGTTACCTGAGACACCTATAAAAATAATTCAAAACTAACTCCTGTTCATTTATTCCCTCTAA CATTTAAGTAAATCTGCCCTGGCGGGATTGGGTTCGTTGTTGTTGTTGTTGTTGGTTTTGACCCATGACCCGATAGCCTACCTCATTCGGTCCA CTGTGGAGTGGATCATGACTACTCCAGCAAGAGCTGTGTATACATCAACACCACTGAAGCATT |
Primers for UN91180 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCAGCGGGGAGTATTTATCA | 59.916 | 20 | CGAATGAGGTAGGCTATCGG | 59.685 | 20 | 254 | 306 | 559 |
2 | CCAGCGGGGAGTATTTATCA | 59.916 | 20 | CCGAATGAGGTAGGCTATCG | 59.685 | 20 | 255 | 306 | 560 |
3 | AATTCCAGCGGGGAGTATTT | 59.799 | 20 | CGAATGAGGTAGGCTATCGG | 59.685 | 20 | 258 | 302 | 559 |