Simple sequence repeat (SSR)
| >UN05378 TAGGCTTAGACTCGGCCTTCGGCTAGGCTTTTCTTCAAATTTTTAAGCAAGACCTGTATAATAGCTTGGGCGCAAAATATTCCTTATACAATGG CACCTTCCATTGAAGCCAAATACTTTTGTTTCGTGTAGTCTCCATCTAAATAGAATCCTTCTACTTGCACTGTTTGGCAGTTGCAGCCTTTCCA TAAGGTGGTTTATATACATCAGGTTTCTTCAGAACATGAGGAGAATTAATGGGTTTCGCAACAACCCATGTAGAATATTACCCTTGTCCTTTGT GGTTTGTTGTCCACTTTTTTTAAGCCAAGATACTTGACAATTTCTTTAATGTAATCAAAGTTATCAGGTGAATCTGGTTTCCAATTAACCTGTG AAATGAGCTAGCAAAGAACCCAAAACAGAAAACTAAGTATCATATGATTACTAAATAAGAAGTACCTGAGAAGGATGCACTTACAAACAAATGC AAATTCTTTTCATGAGAGGAACCATTGAGCATCATATACAAACGCTTGTTTTCATGTAATAACTTTTTTTTCGTGCAACAATGGCTTAGTCACA TTCACAAAATGCTAAACTTTGACTAAACATGCACAAAGTGTACAGGTTTTTTCCTCATTTCATTCACTCTACACCTCGAAAGTATCAAATATAC CTTTAAACCACCATTGGTAATAAGTGTATGTTACAAAAAAAACTGTCAGAAAATGAAATGCAAATCTGCTAATGGCCAACGAGAACCATTGACG ATAATTATACGAAAGCCGTCGCATATTAAGCACTCTTAATATGTACAAGTTCGTCTCCATCTCCGTAAATTCAGTCAATAGTTAGCAGCAGATA TTTTAAGCTAATCGGATCTACAATAACACTTTACGCGATTTAACCGAAATCAAAGTCACAATTTCATCAAATAAGTCACCAAATCTCGTAAAAA TCAACGCAATCACACACATAAACTCTAACAACAAAACAAAAGAAAAACAACCTCTTGATCTCCAATGACCGTAAACGCTTTAACGAAAAAGTAG ACAACCAACAACTTCTCCTCGACCGTTTTCTCAACAACTTCACGAATAACGTTCACAGATTCACGTCTCATGAGCTCAACCAAACTCTTCCGTA CATCTAACATCGATTCACATCACGGGATCAAAACTGATTCGAGTAGACGCAACATTCCTTCATCAAATCTTTAGATAGTGATATTCCATTGTAT TGCGTTATTTTTGATCAATTTGATATGAAAAGCGGTTAGGGTTTCAATATGGTGGTTAGTGTGTGAAAGGAGTGTGTGTGTGTAACCTGTGAAT TGTAAGAGTAGTGTGTGTTGTTTGGG |
Primers for UN05378 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CGTCTCATGAGCTCAACCAA | 59.984 | 20 | CCCAAACAACACACACTACTCTT | 58.226 | 23 | 245 | 1098 | 1342 |
| 2 | ACGGGATCAAAACTGATTCG | 59.933 | 20 | CCCAAACAACACACACTACTCTT | 58.226 | 23 | 193 | 1150 | 1342 |
| 3 | CGCAACATTCCTTCATCAAA | 59.664 | 20 | CCCAAACAACACACACTACTCTT | 58.226 | 23 | 167 | 1176 | 1342 |