Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN91061
CGGCTATACAGATGATTCTTGTGTTGGAAATACGTACTTCGCTTCTTAGAATATAGTAACAGCAAACAAAAACTTGCTTCTTAGAACAATGATA
ACGCTAAACATTTAAAACTCCATTTTGGAGAGGTCTTTAACTAAATCCGGGAAAGATATGTAAGGTAAAATGTAACCGGTGATGAGAAAAACAA
ACAAACTTGACCAGATATGTTTAACAAACTTATTTCAACAACCGATACTAGTCTTATTTCACAAAGTAGTAATGTATCACCGCCGCCTACATAC
GAGACCTTGAACTTGCAGATGTCGATAATGGTGCACTCAGTGGGACACCGTTTCTCGCTCTTTCTTCAAGAAATCTTGATGGTTTGTATAAGTT
GCTGTATTTTTCAGACCATTTCTTCAAACTTTCATAGATGTGTTTAGCCCCAACCAAGTCTCCCCAGAATACGATACCACCACGGTAAGAAGGA
AAACTCATCCCAAGGACAGATGCAACATCAAGATCTGATGCCCGAACCACAACTCCTTCCTCAATAACACGACAAGCCTCATTCACAACTGGGA
ACAATATCATCTCCACGATTTCTTTGTCGGTGATGGATATAGGCTTTCCTCCCGGCATAATGTTGACTTGTCTTTTAGCTTCCTCAATAATGGG
GAAAACTTGGGGGTCGGGTTTTGGCTTACTACCCTTCTCATAAAGGTAATATCCTTTTCCATTATTTTTACCATTTCGTCCACTTTTAATAAGA
AGATCAACTATAGGAGAGTGGAATGTACGGTCAGGAAAAGCGTTGGCGAATTCTTTACCTACGGCAACAGCTACACCATATCCAGCTAGATCTT
GTAGCTGGAAGGGTCCCATGGGGAGACCAAAGCTGCTGATCAATCTGTCGATTCTAAACAAATCCACACCCAAATAAAGCAAAATATGGGCACC
CTGAGTGTATGGAAAGAAGGTGCGGTTTACTGCAAAGCCAGTACAATTTCCAACAACGACGGGAGATTTTTTGATTATCTTCCCAACGGTCATA
AGGTCTAGGATCACTTGTGCAGAAGTCTTTTCAGTTCGGACTATCTCAAGTAGAGGCATCACGTGAGCCGGGCTGAAGAAATGGGCCCCCACAA
CTCGATCTTGAGATTTTATTTTCTCTCCAACTAAATTGAGGTCGATGGTAGATGTGTTAGTTGCCAAAATGCAATGAGGGGGACACACTTTCTC
GATCTCGCTAAAGATCTTTTGCTTCAATGGGACATTCTCAATAACTGCCTCTATAACCATATCCACATCTCTGAATTCTGAGTAGTCCAATACC
CCTTTAACCATCGACAAGGCTTTTTCAGCTTGGGCCTGTCCTAATCTTTTCCTCGCGACCAAACCTCGAACATTACCTTCTATCGTCTTTATTC
CCTTCTGAAGATACTCAGAGTTGACTTCCTTAACAACAACGTTTATGTTGCCAAGGATAAGAGCTGTGGCTATTCCTGAGCCCATCAGACCTCC
ACCAATCACAGCCACTTTCTTGACGGCCCTTGGCTTGAGACCAACATCGGTAACTTTGGGTACCTTTGAGATTGTACGTTGTGCAAAGAATATA
TGAACAAGACCCTTTGATGTGTCTGAAACAACAAGCTGGTTGAACGCCTTAACCTCCTTCAAAACGCCAGCGTATCCTCCATGAACAATGCCTT
CCTCAATCACATCAAGACAAGCTTGATGTTGTGGCATATTCGGAGCCGTCCGTTTGACTAATTGTCTAGCATTTTTAATTATTTCACGTGCTTC
AGAAAGGGAACCAATCTTGTCTGTCCTATGAAGTGAGCGGACCCATGGTTTACGTGCCTCTGCTATGTCTAACGCCCATTGCCTTGATACTTTC
AGTAAATCTTGAGGAGGGACAATAGCATCGATAAGACCTAGCTTCAACCCTTCCTCGGAGAGTATCGGTTTAGACGTCAACATCATGTCAATTG
CCTTCGACAACCCCACTAGCCTAGGAAGCCTCTGGGTACCTCCAAAGCCTGGCATCACTCCAAGAGACAATTCTGGCAAGCCGAGTTGAGTTTT
GGGAGCTGCAACACGGGCATGGCAACCCATTGCAACTTCTAGGCCACCCCCGAGTGCAAGACCTTGTACAGCAGCAACTATAGGTTTCTTGCAA
TCTTCGAGTGTGTTGGTCACGAGGGCAACAGATACATCAGGGAGGACAGATATGTCTCCAGTCCTGTGAACTTTCTGGAAAACGTTGATGTCAA
ATCCACCGGAAAATCGACCATTCTTGCCAGTCAAAACGATAGCTTTTACATCATCCCTCCTCACAGCTTCTGCAAACTTTTCCTTCAATCCAGC
AAGAATTGGAACAGCTAAAGCATTAACAGGAGGATTGCAGATGGTGATCAAAGCAACACCATCTGTACCCACTTCCATTGTCACTATCACTTCA
CCCATGATAAGATTATTATGTGCACACAATAACAACTAGGATTATTAAGTCAATTATAAAAAGAAGAAGATGAAATGATCACGAAATGTGTAGG
TATATATAAAAGGAGGAGAAGAGTGTGGATTTGACCAAATGGGAATGCAATTGATTTGTTTGTTTGTTTGTTTGTTGCTATTTTAGACCATGGG
CTGTTTTGGT

Primers for UN91061 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1AACAGGAGGATTGCAGATGG 60.07320CAAAACAGCCCATGGTCTAAA 59.98221266 23752640
2GGAGGATTGCAGATGGTGAT 59.89320CAAAACAGCCCATGGTCTAAA 59.98221262 23792640
3GCAGATGGTGATCAAAGCAA 59.80520CAAAACAGCCCATGGTCTAAA 59.98221254 23872640