Simple sequence repeat (SSR)
>UN91061 CGGCTATACAGATGATTCTTGTGTTGGAAATACGTACTTCGCTTCTTAGAATATAGTAACAGCAAACAAAAACTTGCTTCTTAGAACAATGATA ACGCTAAACATTTAAAACTCCATTTTGGAGAGGTCTTTAACTAAATCCGGGAAAGATATGTAAGGTAAAATGTAACCGGTGATGAGAAAAACAA ACAAACTTGACCAGATATGTTTAACAAACTTATTTCAACAACCGATACTAGTCTTATTTCACAAAGTAGTAATGTATCACCGCCGCCTACATAC GAGACCTTGAACTTGCAGATGTCGATAATGGTGCACTCAGTGGGACACCGTTTCTCGCTCTTTCTTCAAGAAATCTTGATGGTTTGTATAAGTT GCTGTATTTTTCAGACCATTTCTTCAAACTTTCATAGATGTGTTTAGCCCCAACCAAGTCTCCCCAGAATACGATACCACCACGGTAAGAAGGA AAACTCATCCCAAGGACAGATGCAACATCAAGATCTGATGCCCGAACCACAACTCCTTCCTCAATAACACGACAAGCCTCATTCACAACTGGGA ACAATATCATCTCCACGATTTCTTTGTCGGTGATGGATATAGGCTTTCCTCCCGGCATAATGTTGACTTGTCTTTTAGCTTCCTCAATAATGGG GAAAACTTGGGGGTCGGGTTTTGGCTTACTACCCTTCTCATAAAGGTAATATCCTTTTCCATTATTTTTACCATTTCGTCCACTTTTAATAAGA AGATCAACTATAGGAGAGTGGAATGTACGGTCAGGAAAAGCGTTGGCGAATTCTTTACCTACGGCAACAGCTACACCATATCCAGCTAGATCTT GTAGCTGGAAGGGTCCCATGGGGAGACCAAAGCTGCTGATCAATCTGTCGATTCTAAACAAATCCACACCCAAATAAAGCAAAATATGGGCACC CTGAGTGTATGGAAAGAAGGTGCGGTTTACTGCAAAGCCAGTACAATTTCCAACAACGACGGGAGATTTTTTGATTATCTTCCCAACGGTCATA AGGTCTAGGATCACTTGTGCAGAAGTCTTTTCAGTTCGGACTATCTCAAGTAGAGGCATCACGTGAGCCGGGCTGAAGAAATGGGCCCCCACAA CTCGATCTTGAGATTTTATTTTCTCTCCAACTAAATTGAGGTCGATGGTAGATGTGTTAGTTGCCAAAATGCAATGAGGGGGACACACTTTCTC GATCTCGCTAAAGATCTTTTGCTTCAATGGGACATTCTCAATAACTGCCTCTATAACCATATCCACATCTCTGAATTCTGAGTAGTCCAATACC CCTTTAACCATCGACAAGGCTTTTTCAGCTTGGGCCTGTCCTAATCTTTTCCTCGCGACCAAACCTCGAACATTACCTTCTATCGTCTTTATTC CCTTCTGAAGATACTCAGAGTTGACTTCCTTAACAACAACGTTTATGTTGCCAAGGATAAGAGCTGTGGCTATTCCTGAGCCCATCAGACCTCC ACCAATCACAGCCACTTTCTTGACGGCCCTTGGCTTGAGACCAACATCGGTAACTTTGGGTACCTTTGAGATTGTACGTTGTGCAAAGAATATA TGAACAAGACCCTTTGATGTGTCTGAAACAACAAGCTGGTTGAACGCCTTAACCTCCTTCAAAACGCCAGCGTATCCTCCATGAACAATGCCTT CCTCAATCACATCAAGACAAGCTTGATGTTGTGGCATATTCGGAGCCGTCCGTTTGACTAATTGTCTAGCATTTTTAATTATTTCACGTGCTTC AGAAAGGGAACCAATCTTGTCTGTCCTATGAAGTGAGCGGACCCATGGTTTACGTGCCTCTGCTATGTCTAACGCCCATTGCCTTGATACTTTC AGTAAATCTTGAGGAGGGACAATAGCATCGATAAGACCTAGCTTCAACCCTTCCTCGGAGAGTATCGGTTTAGACGTCAACATCATGTCAATTG CCTTCGACAACCCCACTAGCCTAGGAAGCCTCTGGGTACCTCCAAAGCCTGGCATCACTCCAAGAGACAATTCTGGCAAGCCGAGTTGAGTTTT GGGAGCTGCAACACGGGCATGGCAACCCATTGCAACTTCTAGGCCACCCCCGAGTGCAAGACCTTGTACAGCAGCAACTATAGGTTTCTTGCAA TCTTCGAGTGTGTTGGTCACGAGGGCAACAGATACATCAGGGAGGACAGATATGTCTCCAGTCCTGTGAACTTTCTGGAAAACGTTGATGTCAA ATCCACCGGAAAATCGACCATTCTTGCCAGTCAAAACGATAGCTTTTACATCATCCCTCCTCACAGCTTCTGCAAACTTTTCCTTCAATCCAGC AAGAATTGGAACAGCTAAAGCATTAACAGGAGGATTGCAGATGGTGATCAAAGCAACACCATCTGTACCCACTTCCATTGTCACTATCACTTCA CCCATGATAAGATTATTATGTGCACACAATAACAACTAGGATTATTAAGTCAATTATAAAAAGAAGAAGATGAAATGATCACGAAATGTGTAGG TATATATAAAAGGAGGAGAAGAGTGTGGATTTGACCAAATGGGAATGCAATTGATTTGTTTGTTTGTTTGTTTGTTGCTATTTTAGACCATGGG CTGTTTTGGT |
Primers for UN91061 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AACAGGAGGATTGCAGATGG | 60.073 | 20 | CAAAACAGCCCATGGTCTAAA | 59.982 | 21 | 266 | 2375 | 2640 |
2 | GGAGGATTGCAGATGGTGAT | 59.893 | 20 | CAAAACAGCCCATGGTCTAAA | 59.982 | 21 | 262 | 2379 | 2640 |
3 | GCAGATGGTGATCAAAGCAA | 59.805 | 20 | CAAAACAGCCCATGGTCTAAA | 59.982 | 21 | 254 | 2387 | 2640 |