Simple sequence repeat (SSR)
| >UN91040 ATTGTGGTGGCTTAAAACAAGCATGGGGTTTTAGCCTAGTAGTATGCAGCAAACCAGAACTGGATACAAAAAACCAGCCTTGGATGAAAGGATT CTGACTGATGGCTGGCATCTCTCATGGGGCAATATTGACCAATAGAAATCACGGAAACATTTTTACCCGATGGTTTGCCTATTAGAGACTATGT ACACCACATGTTTCGGACATGAAACAAATTCAGTCGGCTCTCAGTTTTAGTATCTCCTTGGCAGTCCTCAACCTAAAATATGGCATGTTTTCCT GCTTGAAGCAGAGCCCGATGTCCCTGCTATAGAAGTCGGCATATTTGATCATAAATACACCACAGTCAAACCCGTTCTGCTGATTAGGAAGGTC CGTGACAAATTCTTGCTTCCAAGAAGTAACATCAATGTCTTCCCCGTTCTTATCTTTCACCTCATCCACAATGTATTGCTCCAATACCCCCATT ACTTGTTTATCAACTCCTCCAAGGGAGTCGAGATACTGAAACTTTTTTTCTTTTTTGTTGATGACAGCCAAGCACCAATGTATTTCTTTATGGA CAGGGACAAATATTTTGTCACACTCAAGAAGACTATATCCCAACTTTCTCTGGGTAGTCCATCTTCTCACGGAGTTGTAGTCATAGCCACCCCT TCCACTTATTAACTTCTTGTAGAAAAACGTGTTGAAGAAATGACATTTCAGAAACTTTTTGGGTTCTCTCCTTTCCCTCTCTTTCAGCAACTCG AGATAAAGGTTAATAACCTCATCGTTTAACCATGCCCCGGGTCTTAAACAGCGTAGAACCTCTCCCGTAATTGTAATATTTGAATTCTCGTGTG TGACCAAAACCCTCCTCCTACTAGCATTAGACAACGCATCAGCAACCAATTCATGGTCATCCTCAGTAAGATCCCGAAAAGGCTCAATCAACAA ATCCTCTTGCTTCTTCTGAGGTGCCAATCGCTTCAATAAAGCTCTCCTCTCCTCAAGCAACTTAATATCAAAACTGCGTCTACTGAGCGGCGTG TCATGCTTCTCAGCCGAATCCCTATACAACTTCCTATGCACCGGCAAACCCGCATCTCGATTCAACGACAACGACTCCAAACTTTTCCCATCCA ACATATCCGAAACAATTCCCAAACCTTTCGCCTTCCCATCCAACTCCCGATACTTAGCCCTAATCGTCTGCACTTCACACGACTTATCACCTTC ATCTCTCCCACCACTCTCCATCATCACAACCTCCGAATCACCCGACGACCTACCCGAACCACCATCATCCTCATTAACAACATCCTTAGCCACA TTCTCCTCATTAACTAACTCAACAACCTCATCATCATCATCATCATCCTCGATATCAAACGTAACAAACTTACAACTATTTTTCGCCGCTTCCT TCGCGCGTTTATAATTCGCTTCTAATTCCTTCCTAACGACACTATCATCCGATTTTCGATTCTCTTTCCTTTTCGCACTAAACCAATTCCCCAT CCTATTAGTACCTAACAAACTACTATCCGGTTTTTTCGGAACAAAGCCTTTTACAACTACACAAGGAGCCTGAATTGGTTTGGAAATAGGCGTA ACGAGTTTCGGATACTGCGATAACCTCGAAACCGAGCTCGAAGTCCTACTCGAACGCTTATTAGTTAAATCTACTACAGGTTTTGAGCCAAAAT AAGGTGATGATGATTTGAGCCTCTTTGATAAGTGTGTGTAGTCATTAAACTGTGAATCGAAATCACGTTTGTTGTTGTTGTGATTGTTGTTGTT ATTGAGAGTTAAAGTGCCCATTTTTTGTTAATGGAAGGATTTGTGATTGTGATTGAATGTTGGCATGTGAATAAAGGGAGCATTAAAAATTTTG AAATTGAAATTAGGGTTTTGGGATTTGGGGGAAAATGGTTTTGTGGTGTGTTTGGGTGACCATATCTATTGTTACATCTGATTTG |
Primers for UN91040 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TCATCACAACCTCCGAATCA | 60.048 | 20 | GGGAATTGGTTTAGTGCGAA | 59.938 | 20 | 259 | 1243 | 1501 |
| 2 | CTCCCACCACTCTCCATCAT | 59.92 | 20 | GGGAATTGGTTTAGTGCGAA | 59.938 | 20 | 275 | 1227 | 1501 |
| 3 | TCATCACAACCTCCGAATCA | 60.048 | 20 | GAAGCGGCGAAAAATAGTTG | 59.853 | 20 | 166 | 1243 | 1408 |