Simple sequence repeat (SSR)
>UN90763 GTGAATTTTAGGTTTAGCTGGACAAACCCTATCAGTCACATAGATACTAGTTGACAATGCTTGATCAACAGGCCTTACTACTTAAATACACTTC ATTGAGTAACACTTGCCATACCAGCCCTATTCATTGAGTCGCTTCAGTGACGGTGCTCGCAAGACTGTTGATGCCAGTGGATAGGTCAGATAAG CTCAAAGTCGTATTATAAATGCTTTTGCCATGCTCTAAGATATGGCCCGTATCTTGCAAGCCAGATGCTTCATGCACAGAACTTCGACCTTTGA CTTTAACAGTGACCATGCTTTTATTAGCCTCTTCACCGGCTTCAATCTTATACATGTCTAAACGAAGTTTTTTCTGTCTTTCAAAGCAGTCAGT CAGATAATCCTCCCTCACAATAGGTACTTTCATCCTCCTCGCCTTTCTCATCTCAGCATGCATATTATCCGGCACTCCACATACAACTAAGCAA TTTGTGTCTTTCTTGACTTGTGGATGAAATTGTCCACCCACGCTCTCAATTTTGGCCTTCCACACGTCCATAGTTTCAGATGAAAAACTGATAA TTGAAACTTTTAAATCTGCCAACTTTTCACTGTAGGATGACTGACTCGTCCCGTTACCAGCCAGTTTTGCGGGAGTATTTGGTGTAGGTGGAGG CATTATCCTAGAAGGTTTTTTCGCCTTTTGTGTCTTAAACCACTTCTTTAGATATTGGTTTTTCCGTTTCTTCTGGAATATTCCACTTTCCTTT TACACGATCAGGCTCAGAAGTGGAGTTCGCGCACTTGCTCCATTCGGTTAAAAACCCTCTGCATTTGTAGGTGCCTCCTGAATAGTTAAGATGC CCGTTACAAAGTTTGCAACTTTCAAGTGCTCCAAAAAGCATCCCATCAGCACAGCGGTCACGGAGGTCTATCTCTGATCCTGATGTACTTTGAT TATTAGCTTCCAGCATTTCCCGCAACTCTGCTGTTGATACATGGTTTTTAAAATCATCTTTAAGAGCCCATAATTCTTTTGTTTCGACCTCTAG CAGACTCTGCAACTTGGAAGGATCCAATTCATTGTTTTTATTATCATCTTCGGTCTTTAGCGCCTCCTTTAGTCTCTTTCTCCTCCTTCACTTC ATCTTTGCCTTTTGTTGGTGGCTGAAACTGTCTCAACCATCGAAAAAATGGCTGACTTATTGGAATCTGACAGGCTTTCCCACCCATCCAAATT TTCTAGTTGAGTAGTTGGAGAAGCGTCCAAGAAACATGTAGCATGATGCCATGCCAAGCCTCTAGCACCTTGACCCTCTGGCTTACTAGATATA CGAACCTCTCCTGTCGCGATCTTTACACTGCAGATCCTACAAGTAGCACGAGTGGTTTTTGAAACTTCAATTACACATTTAGTAGCAGCTTGTG CAGGTGTACTTGGGGACCCGCCACCTCCACCTCCACCTTCAACATACTTTCTTATCTTCTGTTGATCTTCCCAACGAAGTGTTTCAATGCCTTC TACATCCTCACAGGATTTTATTTGTTTCGCCTTCCTCAGAATGCACGAAGCATGATTCCACATAGGCATAAGACCATCAAAATGAGGGGATTGG ACCATTTTTCCAAGACGCAATACTTCTTTAGAAATAGGGGATTTGCATGTTCTACAAGATGATCTTCCTGATTTTGCATATTCTGCTTTCCATG GTTTTTCTGGTGTCGCCATTTTCTAAACACACAGTTACTGTGTGTGTGTGTTCTTGGAACAGTGGCAGTTTAATCACTTTAATGTGTTGTGTTT TT |
Primers for UN90763 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GAGGGGATTGGACCATTTTT | 59.996 | 20 | TGATTAAACTGCCACTGTTCCA | 60.534 | 22 | 181 | 1588 | 1768 |
2 | AGGGGATTGGACCATTTTTC | 59.996 | 20 | TGATTAAACTGCCACTGTTCCA | 60.534 | 22 | 180 | 1589 | 1768 |
3 | CCATTTTTCCAAGACGCAAT | 59.938 | 20 | TGATTAAACTGCCACTGTTCCA | 60.534 | 22 | 169 | 1600 | 1768 |