Simple sequence repeat (SSR)
| >UN90666 AGTAGATTATCATGATTCGAGCCCAACAGAAAATATATCAAAACAATGAAATTATATATACCAAGACTAAAGCGCCCGTTATACCCAGAGGTAC TAAGAAGAAAGTAAAATATAAAAGAAATGTACCATTTATATGTTTCTAAATGTATATAGACTGCCACCAGAAACCATCAGAATGATCACCACTA AACCACTTCCAAACAAGCTGATGAACCGCAAACAGCACCATTTTGCCAAACACGACCAGCTACCACACAACATGAAGTCCAACATGACGACCCC TCATACAGCATACGGAGGAGCCCTTGAAGCCATACTCGTAACTTGAGCTTGCATCTGAGCAGCACGAACCTTCATAGACGTAGCACGATGAACA AACTGTTCTCGCGACAACAACCTCACATTCCTCAAATAAACATCAACCGGAATCGCCCCTTCTTGAACAGCTTTATCCAACGCATAAATCACAT CCTCAATCGCCAAATCAGACGCCGTACACTCCAACATCTGCTTCGACAACCCATCCACCGGCTCAAAAACCTCATCACCACTAACACCCTCCAC ACCACCCCCATTCAACTTCCCTTCATTCTCCTTCACCCACGCCTCCAACACATCCGTATTCATCAAAACCATCTGCAACTGCTGCTCTAACCCC TCCTTCTCATCCCTCATCTCTCTCAAACCCTTATTCACCTCCTCTTCACGTATCCGCAACACATTCTGCGCCGACAACATCCCTTCCATCTCCA CCTCCCGCTTCTTCCTCAACTCCTCAACATCACCATGCACACTCTCCACCAGCTTATTAATCACATTCCTCCTATACACCTCCGCCGGATCCTC CGTCGCCGTCACACCCGAATTCCCCGACAACGAATTCGATGACAAACTCGGCGAAATCCTCCCACCTCCACCATACGGCGACTGCGGATACGTC CTCGGCGGAATAGCCGGCCGCACCGACGCGTTACTAAAACTAGGATTGGAGTTAAAGCTAGGGTTAGGGTTTACGCTAGGGTTAGGATTCGGCC TACGGTTCGAATACAACGGAGGATCCAACCCGAAATAATGACTCAAATTCCTACACAAATCAAGCAAATTACTACTAGGATAAACCCAATTCTG CAAATAACTAACCACAACCAAACCATTAGGGTTCACAAACGGATGCTGCCTTTTAATAACCATATCGCGCGTGGGATTCACGTAAACATGAGGC GCGTAACGCGGATACGTCTCCATCAACCAAATCACAACAGGGATATTATAAGTAACGTTTTGATAAACCATAGGGATAGTACCTTCAGACTGGA GTAAATTAACAGACCTGCCGTCGTTATGAGTGAAAGTAGCGGTTTTGGGGGCCATTGATGGGTAGGCTTCTGTTAAGGAGATTAGGTGTTGACG GATGAGCCATTTGACGTCTTCGTTGTAGGGGAGGGAGGATGGGCCGCGTTGTGAGAGGACTGTTGAGAGGAATTGTTGGTGGAGTTGTGGTGAT GGTGATGGTGACGGTGGTTGTGAAGAAGAGGGTTTGGTGTGTGTGTGTTTTTAGGTGTACGGTTGTGAAGAAGAGGTCAAAACAAAGATTACAT CACCTAATCTGATTCGCCATCAACAGGTCACTCGGAAGTGTTGTTCTTCCTGCGTCTTTGATAATGAATCTTCCTGTTGTTTAGAAAGGAAAAC CTCACAAAAATGAGCTCGTTAGAAAGGTTTGGAAGGCGGTGGAAAAGCTGGATGTTTCATGATAAGATCGTAGATATGTTAACATCAATGGAAA AAGTGACTATGTCGGCAGAAGCCAAAAAAAGGCCAAAAAAAAAAGCTGATGGGCCTAGCAGGTGGG |
Primers for UN90666 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GACGTCTTCGTTGTAGGGGA | 60.111 | 20 | TTCCGAGTGACCTGTTGATG | 59.676 | 20 | 213 | 1423 | 1635 |
| 2 | GTGGAGTTGTGGTGATGGTG | 59.846 | 20 | TTCCGAGTGACCTGTTGATG | 59.676 | 20 | 147 | 1489 | 1635 |
| 3 | GACGTCTTCGTTGTAGGGGA | 60.111 | 20 | TCAAAGACGCAGGAAGAACA | 59.566 | 20 | 237 | 1423 | 1659 |