Simple sequence repeat (SSR)
| >UN90575 GTAAATTATAACACTCAAAACTGTATTAAGACGATCTTCTCAAATTGTTATATTTTTACAGTAAACACTCGTGAATACAGCCGTGTGTGAGATC TAAATGTTTGCATATGAAAAGCTGTGGCTATTTGACCTCTGAGGCTTAAGTCAACTTTTAACCTCCTGCTCCTCCTCTGGTAATGCAGTTCCTT TCAAATCCATATGGCCAAATAATGACACCAATGATGGGGGCTTAGAAGTTCCATTTGCCTTCATATCTATACCTGAAGTTCCAACTGATTTCAG CATGTCCGACTTTTTGAAGGTATACCCTATGAAATTCGAGTCTTTTGATGTTAACATCTTTCTCCAAGGCCCCACTCTTGGTACTGCTGACTGA GGATCTTCCACCTCAGGGAACTTCTCGAAATTCTGAGTGTCCAGTTCTCCAGTGACAATCGGTTTATAGGCAGCTTCCATTTCATACAGCATAT CCCACTTGACACCATTAAACCATGGGTGTGCCTTTATTTCGTCCACTCCTCCAGTCCCCAACCTTGATTCCACATCACATAGCAAATGACAGAT CAGATCCCTGGCCTCTTTGGTAACTTTTGGCTCCTCTGGGAATTTCAAGCATGTTCTCCAATTGATGATCTTGCGACACGTCATCCTGGGATCA TCAGAGCAAAATGGGGGGTAGCCTATAAGCATCTCATACATGATTGCACCCAATGACCACCAGTCGCACTCCATTCCATATCCCTTTTTTAGCA GTACTTCAGGTGCCATATAGTCAAGAGTTCCGACTGTAGAGTATGCCAGGGCACGTCGGTTACGTTTCCACTGTTGCAACTTTTCCTTTGGCAT TAACCAAGGAACTTGTTGCCCGTCAGTATCATTTATGGGCCCTTGATTTGCGTAATCTTCATCATTTAACAATATTGACGAGAATTTACTTTCC AGGGGCTTACACAAGCCAAAATCGGACAACTTTAGATGACCATTTCGGTCCAGTATCAGGTTATCTGGTTTAATGTCCCTATGTATGTAGTTAT GCTGGTGAATAGAATGAATAGCCATGATACTTTCAGCCATGTAAAATCGAGCAACGTCTTCAGAAAGAATGTCCTCTCTCATTAGCAAAGTCAT GATGTCACCTCCCGGTAAATACTCCATGATAAGGTACAAGTAATCAGAATCTTGAAAAGAATAGAATAGTTTTACAATGCATCGACTATCAACC TCCACAAGCAAATTCCTCTCAGATCGAACATGCTCAACCTGCCCACGACTAAGCATCTCTGATTTCTTCAGCTTCTTCATCGCAAAGACTTCTC CGGTAGTTTTAGCACGACATAGCCTGACCTCTCCAAAAGCACCTTTACCAATCAATGTCAAAAGCTCGAAATCATCAATCCCAATCTTATGCCT TTGCAACCTCATATACTCAGTCTCCTTCTTCTCCAAATTCCTTAACATCTGCTCCTCTTCCTCACTCGATACCTGCGCCTCAGCCGCCTTCCTC TGTAACGCTCTTCTCCTTTCCTTACGATCCTGCAAGCCTTGCAAATAATTCTTATAATGATTCTCAATCAACTGTTTAGCAGCAGCAGCTTTTT GTCTCGTCACCGGTGACGACACAGCCACGTCAGCAGCAGCAGCAGAATCCATACCGAATCCAATACCTGACGATGGTTTACCATCACCGCTTTC CATTTGCATACTTATAAAAAAAATCAGATGATCTGAAATGAGTATATAATAATAATAAGTAGTAGATGATTTGAGATCTAAATTAAATGAAGTG AAAGGAGATTGATTAAATATAAGGAATCTTTTGACAGTTATGAGTTATGAAAGTGATGAAATCGAGGAGGTGAAAATGAGCTGGTAGTAGTAAT ATTTTTGTCATTCATTTAGTTATTAGTGTTTGTGTTAAAACTGAGTGACAGTAAGTTGGTGTGATAGAACTGTCAATGGGGATGTAGAATGGAA TAGATTACAGGGTGGACTCATAACTGGATT |
Primers for UN90575 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TCCCAATCTTATGCCTTTGC | 60.038 | 20 | CGTCAGGTATTGGATTCGGT | 59.813 | 20 | 276 | 1395 | 1670 |
| 2 | CTGCTCCTCTTCCTCACTCG | 60.275 | 20 | GTATGCAAATGGAAAGCGGT | 59.967 | 20 | 245 | 1459 | 1703 |
| 3 | TTCCTTACGATCCTGCAAGC | 60.352 | 20 | GTATGCAAATGGAAAGCGGT | 59.967 | 20 | 182 | 1522 | 1703 |