Simple sequence repeat (SSR)
>UN90537 TTTGGAGTCCAGTTGACATGAAAGTGACCTAAACAATGTGGTTAACCAATAATACAAATAACAATAGGGAGCAGAGGGTCCTCCGATTGACATC TACACCGGCTCCTTAGCAATAAACGTGCATGAAGCAGGTTACTCTATCCCCGGAAACATTAAATAAACACATTTATTTTATTATAAAAATTTCA TTTTCATTTTCCATATCTACATCCAGTCGCATTAGATGCCTGCCTCGCCAACATATTTATTCCATTTTCACGTTGTTGTATTTAAGTAAGGAAG AATGCTGTTATTACCAGGTGAGCCAACAATACTAAGCTTAATATTAATCATGCAACAGCTTAAGTCTCCCTTGGTTCAAGCCCAGCAATTTCTC TAACCACTTGAGCTTTGTCAGCCTCAAACTGTTCGTCCTCTTTATCCGGCTTAAAATCAGCAAAGAGACGGAGAAGCTTGCTCCTATTTGCAAC AAGTATGCTGACTATGTCAGCTGGCTTATGCTGGTTGGCTGCAAATAACTTAAAAACATGAAATGCTTCTATCTGAATGCTCTTGCTCGATTCT CTCAGAAGATTCATCAAGATCCTCAAGTTGTCCACTGAGCTTGCATATCGTGTCATCACAGCAGAATTTGAACGGTCTAGCAACATGTCTCCTA ATAGCTTGATAGCTTGTCTTCTTGTTATGTAATTGGGTGACTCGAGAAGCTTTGAGTTGTATTCTGCAAAGAACCAGTCATAGTTTTTGGAAAG AAACTCAGCAACAGTTGATTTGTGTCGAGTCAAGAGTTCCTTGAATGTCGCTGCGGCATCAGCAGCAATATCAAAATTAGGGAGTTGAATAAAA TCAAAGAACTTCTTCATATGCTGCGACTCCAATACATACTTAGCAACACTTTGATGACGTATGCATTCCCTGAGCATCGCACCATAATGTAATG CCATATCTGGATTTTCATAACCAGAAGCTAAGATATCCATGAGATCGATATTTTTCTCGAGATAGTCGCAGGCGATCAACCGGGAGTGAACCTG CTGGCGTTGGAGGTTGGCAACGATTTGAGTAGCATCCTTGCGGGCTTCTAGGTTCAATTTGGGGAGGCAAATGATAAAAAGACGAAGAGTGTTT TCTTTAAAAAACTCTTGAGTGAGTTGAGCACAGGCTTCGGCAACGGGTTCGGCTTCACTGTTGCCGTACAGAATCTGCTTCAGCTCACGGAGGA CCTTACTCAACGTCGCAAACTTTTCATCGCGTTTGGAATCTTTGGCTGAAGAAGAGGAGGAGGAACTGGAGTCGAGGTAAATGAGGAGATCCCG AGTTTGGCGGACCAAGTCAACCGGTGTCTTTGGCTTTGACTTGAACAGACCTTTCATTCCCAATCAACCAACACAGCAGAAGAAGAAACAAAGT GTTTGTGTGGTTGGATAACAGAACAGCAGCAGATTTGTTTGTTTGTTTTGTTTGTTTTGTTTGTTTTATTTGTTTAGAGAGAGAGAGAGTTTGG TTACTGCTGCTGTTTGTGTGGTTGGATCTATCTATCTAACTTAAGTCTTCTTTTTCACTTC |
Primers for UN90537 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AAGTCAACCGGTGTCTTTGG | 60.005 | 20 | ATCCAACCACACAAACAGCA | 60.008 | 20 | 202 | 1330 | 1531 |
2 | AAGTCAACCGGTGTCTTTGG | 60.005 | 20 | AACCACACAAACAGCAGCAG | 59.946 | 20 | 198 | 1330 | 1527 |
3 | TTGGCTGAAGAAGAGGAGGA | 60.065 | 20 | ATCCAACCACACAAACAGCA | 60.008 | 20 | 268 | 1264 | 1531 |