Simple sequence repeat (SSR)
| >UN90526 CTAAAACATTAACCAGTACCTTACCTGGTTGTACTAGCACTCAATTGTCAATAGGAGTGAAACAACAATCGACCAACGTTTCAAGACAATGAAC AAAAAAACAAGCCCTCCTAAAAACAAGAACCTAATCCCTACTATTCAATCTTTTCAACACATACAAAACTAAACAATGCTAAACCCTTTGTGTA TCTTTCACATATCCTTATCAATGATATCCCGCATCATTTGAAGTGGGATGACCCCTTCAGTTCTGATGGCGTCTTTGCTTGGATCAGGACTAAT AAAATACAATGTTGGTAGACCTCTTACCTGCATGTCACGTGCAAATTCATACTCATCATCTGTATCAACCTTGACAATCATGGCATTGCTTTCA TACTCGACTGCAAGCATTTCAAGCTCTTGAGCCATCAATATACAAGGGCCGCACCATGTCGCGTAGAAATCGATTATCAATGGCACATTTCTTT CTCCTTTTACTAGTTCTTGAACCTCTTTAGCAGACAACTTTTTAACAAGATAATCTTGTCTAAGATATTGTCCAGAAGGTGGTTTAGCAAGCAC TCTTGTTTTACTTAATGATTGGACTGAAGATGTTAAAGATTGGGTAGTGTTGGAGAATATGAAATCTTTTGTTTTAAGTGGAAATGAAGAAGAA CGTTGTTGTTGTTGTTGTTGTAAAGGGAAAAAGCGAAAAATAATTAATAATCGTCATGCGTCTAGCATTAGAGAAACAAGGCCTGGAGGACCTG CTTGTTGCTTCCATGTCCAGCAATTGGTCAGTCCAAGGATTACAGAGTTGGTTGCTGGATTTTCAAGCAGATGTCTGTTAGATCGTATTTTTTA CAACCTTGAATGATGTTTCAAGGGGCAGCCGCCTTCGAAAGCGTGTTCAAGTACATCTTCCATTCTCTTGGCAAATAGTATCTCCAAACTTCCA AGAACAGCTGAAGGTACTTCAACTAAATCTTTCATATTTCTTTCCGGCAGGATAACTCTCTTAAGCCCATAGCGGTGTGCTGCCAACACCTTGT CCTTGATACCCCCTACGGGTAAAACTAAACCACGAAGTGTCATCTCTCCTGTCATCGCAGTATCTGCTCTAACCCTTCTTCGACTAAAAAGTGA AACCAGTGAGGTGACAAGTGTCACACCTGCTGATGGTCCATCTTTTGGTACGGCACCAGCAGGAAAATGTATATGAACGTCCCGCCCTTCTAAC AGATTACTTTCTTGTTTAGTAACCAAATTAAGTTCAGTTGCCCTAGCTCTCACCCATGTGAGTGCTATCTGTGCTGATTCTTTAATAACATCAC CGAGTTGCCCAGTGAGATGTAGATCTCCTTTTCCTATGGTTGCTGTAGCCTCGACAAACTGGACTTCGCCACCGAAGGCAGTCCAAACGAGGCC CACTGTAACCCCCGGAGTTACCACCCTCTCTTCAGCTTCTTTATTATCATACTTTGAAGGCCCGAGTACTTTTTCAAGCATTTCTTCATCCACA ATCAGCGGTGACATAATCCTGAATACTTTTGATAAATCATGATTGTTAGAACCCATTGGTAGAACTTCCATTTCTACTTCAGCCCCTCCCTCAG CAACTCTACTCTCCAACAATGATGACGTGATTGGATGAATATTTTTATTAAGTGGATGATTATGCTCTTGTTCTGCCACTGTTACAGCTGCTGC ACGAGCTAATGCTGCAAGGTTCCTCTCCAGATTCCTCACACCAGCTTCTCTGGTGTACCGCTCAATAACTAGTTTCACCATTGCCTCCGGAAAT TGAAGGAAATCAGAATTTAAGCCATGTTGACTGAGAACACGTGGAATTAAATGGCGCATTGCTATTCTAAGCTTCTCTTCAGATGTATATCCAG GAAGTTCAATCACTTCCATTCTGTCTAAGAGTGGGGGAGGAATTGGTTGTGCCCTATTTGCAGTGGCCACAAATATCACTTTGGATAGATCGAA AGGAACATTCAGATAGTGATCACTAAATGTTTTGTTTTGTTCTGGGTCAAGCACCTCGAGCAGTGCTGAAGCAGGATCACCACGAACATCAGAA CCCGTCTTATCAATCTCATCCAACAACATAACGGGGTTGCAAACGCCTACTTTCTTTAATCCATCAATAAGACGGCCTGGCATGCTTCCAATGT ATGTCCTCCGGTGCCCTCTAATATCAGCCTCGTCCTTCACACCACCAAGGGATATCCGTATAAACTTCCTACCCAAAGCAGCAGCAATAGATGA CGCCAAAGATGTTTTCCCGACACCCGGTGGGCCAACAAAGCATAATACTGGGCTCTTGGCATCTGGTTTCAGCTTGCGAACTGCTAAGTATTCA ATGATCCTTTGTTTGACTTTGACTAAACCATAGTGGTCACTGTCGAGCCGATCTTTTGCAGCTTTTAGGTCTAACTCAATCTCCTCACTGGTTG TCTCCCATGGCAAATCAGCAAGAAGCTCGAGATACACACGTGAGCTATTATACCCTGGTTGCTGAGGTTGCATTTTTTTCAGTCTCCTTAATTC CCTCTGTGCATGCTTCCAGATATTTGGAGGCATTCCAGCATCTTGCATCTTTCTTTCAAGAGCAGCGACATCATCGTCTTCATCATCATTGTCA CCGAGCTCTTCTTTGATAGCCCTCATCTGCTGGCGAAGAAGATATTCCTTTTGTGATTTTGATAATTGCCCTTCGACCTTTTGTGTAATCTTCT CTGCCACACGAATAGACTGTAAATGGCGCTCAACTAACTCTGTGGCCTTTGAAAGCCTAACTTTTACATCAACAGAATCTAACATAGCCAACTG CTCTTCAAAGCTAATCTCAAAGCTAGCGACAAATATATCTGCCAGTTTGTGCACAGGAACCGTCTCCAGAAGAATTTTAGTCCTTCCCGCAGTT TTTTGTTTCTGTTCCAGAAGAGAAATGAGCTCCATGGCAGTTGATTTGAACTGACGAGACAATGCTTTGAAGTCAGCATCTTCTTCTACTTGCT CCATCTCGGCTTTGGTCATATCAATCGGGGAAATTTTAGCAGTAGTGTATGTTCCTCGTGTGTTGAGCTCGTCGACACTAAATCTACTCAACCC TTCGAGAACGACAATATATGTAACCCTTCCACTTGGTTTCTCAACACCTCTTGATAAATGTAACGCACGAGCAGCAACTCCCCTTGTATGCCAA TGGATGGGTTCGTGTTGACTTTTTCCATCAATCTTGTGAGCTTCTAATAAGCCTGGCAGATTCTTTGAGCTCTTATCACCTGAATCAGCCCCTT GTGTTGCAACAGAACCGACTGTCATTGTCTCGGCAGCATCTCGAACAGGAAGAATGCCAATCAATCCTTTCTCCTCCCTCTGCCATAGTTCTTC TTCCACCAATTTCACACTGCTAGG |
Primers for UN90526 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CAGAAGGTGGTTTAGCAAGCA | 60.426 | 21 | GAAGCAACAAGCAGGTCCTC | 59.997 | 20 | 221 | 543 | 763 |
| 2 | TCCAGAAGGTGGTTTAGCAAG | 59.364 | 21 | GAAGCAACAAGCAGGTCCTC | 59.997 | 20 | 223 | 541 | 763 |
| 3 | TCCAGAAGGTGGTTTAGCAA | 58.352 | 20 | GAAGCAACAAGCAGGTCCTC | 59.997 | 20 | 223 | 541 | 763 |