Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN90518
CCCTCTCGATCATTATGCCCAATCAACTGCAAAATTCAAAATTTACTCATCAATGAGGACATATGTACAGGAATTAGCTCCATTGGCGCACCGG
ACTGCAATTTTCTAACTAGTTTTCAAGAACTCACATTTAGCTGGAAAATCAATTCATGCAGAATCAGCTATGACAGAAGCCAATATTTGGTGCG
TCTTCAATTCTTGAGCTTTTCTGCGGTTGGATTCCATGACGATAAGTAGTGCTGTGATGTCAGCAGGGCTAACCCCACCAACCCTGCTTGCTTG
ACCAATAGTTTGTGGCCTCACCTTTGATAGCTTTTCACGTGCTTCATGCGATAAGGTATTCATAGAATGATAATCTAAGTCCGCAGGAAGGGGT
TTATGTTGTCGATGAACCATCTGTTGCAATTGGCTGTGTTGACGTGCAATCAAGCCTTCGTACTTGATATCAATCTCAATGCATTCTTTTTCGA
TCCTTGACATGTCATCATTTCCAAAACCATGCTTGTCGAACAGCTTGTATTCGATATGTGGCTTTTTAAGAAGTCCTTCGAGTGTTGAGTGATC
CTTGACTGGCTGACCCGACAGAAGACTAACCTCTTTAAATAATTCTTCATTTGTAACCCGTACACTCTTCAGTCTCTTTTTCTCCTCTGAGATT
CGAGCTTGTTTGTCCTGATATAATGTCCATCTTTTGTCATTAATTAAACCAATTTCACGACCTAGAGGCGTGAGACGACTGTCAGCATTATCTG
ATCGAAGAATCAACCGGTATTCTGAACGGCTTGTCAGCATACGATAAGGCTCTCGAAGATCTTTGGTGACCAGATCATCAATTAAAGTGCCTAT
ATAACTGCTTTCCCTCTCAAGAACAATAAGGGATTTCCCCTCTGCATGCCTAGCAGCATTTATTCCAGAAATAAGTCCCTGAGCAGCAGCTTCT
TCATAACCTGTTGTTCCATTGATTTGACCGGAGAAAAAGAGTCCTTGTATCTTCTTTGTCATAAGAGACCTTGAACACTGATGCGCAGGTAAGT
AATCATACTCTACAGCATATGCCGGCCTCAACATTGAACAATTCTCCAATCCTGGTAATGTTCTCAACAGTGGTAACTGTAATCTTTCAGGTAA
CCCAGTTGAGAAACCCTGCACATAAAGATCAGGTACGCTTCGACCTTCTGGTTCAAGGAATATTTGATGGGAGTCTTTATCTTGAAACCTCACA
ATCTTGTCCTCAATTGAGGGGCAATATCGAGGTCCCTTGGCTTCCACCCATCCTCCATATGTGGGAGTCTCATGTAAATTGTCTTTTATCATTT
GATGAGTGACTTGTGTTGTACGCGTGAGATAGCAACACATTTGTTCCCGTTCGATGTGGTATTCAGGATCAAAACTAAACCAGTTCACCTCTTC
ATCTCCGTGTTGAGGCTCCAACAGAGAAAAATCTACAGTGCGTGAGTCAACGCGTGCAGGTGTCCCCGTTTTTAGCCGATCAGTTTCAAATCCA
AGTGATTGCAAGTTTTCAGTGAGACCATGCGAAGCTGATTCGCCAGCTCTACCCGCAGGCATAGAAGTTCTTCCAACCCAAACTTTTCCACTCA
TGAAAGTGCCAGTAGTAAGTACTACAGATTGTGAATAAAAGTCCATCCCAAAAAATGTGCGAACACCTTTGACATCATCATTTGTTCCTAGTAA
GAGATCTGTTACCATCGCCTCCCTTATAGACAAGTTGGGAGTGCTCTCTACAATCTTTTTCATCTCAATAGCATATTCTCTCTTATCAGTCTGA
GCACGCAATGCTCTAACCGCAGGGCCTCTAGAGATGTTAAGAACACGCTTTTGTAGATAACACCTATCAGCCATCTTTCCAATTTCACCACCTA
ATGCATCCACTTCATGTACTAGTTGAGACTTTGCAGGTCCACCAACTGCCGGGTTGCAGGGCTGCCATGCGATTCGGTCAATATTCAGTGTTAA
AAGAAGAGTTTTTGCCCCTAAACGAGCCGAGGCAAGAGCAGCTTCACAGCCAGCATGGCCACCTCCTACCACTATCACATCATATGTTTCATCA
CCCGTTGCAGCATTATTCCAATCTGATGAGGTGGAAGCAGTTACTGAATAACTACGTGTAGGGAAGAAGGTGAAGGAGACACGTGGCTTGCACG
TGCGAGTAAACTTGAGTGATGATGATGATGATGAGCGGTGTGGGCGGAGGTAAGGGAAGAGTGACACGTGGCGTGGGAGTCGAGTGAAGTGGAG
TAGTGACATGGCGGCGGTTGCCATGTTTGGTGG

Primers for UN90518 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1ATCACCCGTTGCAGCATTAT 60.36120CCACGTGTCACTCTTCCCTT 60.15120169 20652233
2ATCACCCGTTGCAGCATTAT 60.36120CTCCACTTCACTCGACTCCC 59.83520192 20652256
3TTGCACGTGCGAGTAAACTT 59.53620CTCCACTTCACTCGACTCCC 59.83520101 21562256