Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN90349
CGTGTTTTGTGTCGGGTCCACTCGGATCTTCTGATGCTTCTACAAACGACTCTTTTCGAACTGTGCTAGATGTGCTTTCGACCAATGCTTTTCT
GTAGGATCGTTGTAAATGCTAACTCTTTTCTGTAGATGTGCGAACTGTGTTAGATGTGCTTTCGACCAACGATTTGTAGCTACATTTACAAATC
TGAAAAACGCATTCATATGCTTTCAGGAACATCAGTTCATTTACATCCAGTCAAGCATACTACATGTTCAGCTAACCATGGTATCAGCCTTCTC
AACAGCATTATCTCATATATCCGCAACACTATTCTCCGGCGCTTGGGCATTTTGACATCAGATACATGTCATGATTTGAGTTGTGGCCCAAACC
AAGTTCCTTAGCTTAAAGGTGGATGGGTTCTTGTATATTGTTGTAGGCCTGCAACGTGCATCCTTCAGTTTCCTGCGCTTGTGTGCCTTCACAA
TCATTCTTGCATCTCCATGTCCTGAACGCGCATTTTGGCTGCCAAAATTGTTTGACGTTCAAAAAGTTCTGCAACACTACGTGACATTGGTTCA
ACCACTGCACGCAGACCCTGCAATTGGGGCAATGCATTCCCCATATATGACAATTCACATCCCATGAAAGGCACCATAACCATTTTTTTCCTTC
AAAAGCCGCCACTTCCTCTGAGCCTCCAAGTTAATTTGACCATCTTCACTTAGTCCATTCTTGTGCCATTCATAAGGCTCCTCTGCTAGAAACT
TTCCAGCCTGGTTACTTGCTGTTAAGTAATCAGTCTTCAGAATCCACCTTCCAGACGCAGCAACAGCAAAAAAAGGTCTCAGTTCTTTTAATGG
GATCTGGGACAATGAAATGAGTTACCTGGTAAGACCACTGGTGAGAAACTTTGCAAACCCTTCCTTTCAGTCGCCGGATGAGGTGTTGAAACTC
CCTTCTTTGCAACGAATGTCCAGTGAATATAACGAACTCCCAGACGCACTCTTCACAATCCGAACCACTTTTTATAAATTGCTTATTTTGAGTG
CCAATCATCTTAATAATTTTAAGAATGACGCGTGCGCACCCACTGATCTGTGGTAAAATCGAAGTTTATTGACACTCTGAAATACGCCTGACGT
GTGGGTTGATAGAGCTTCATGTAATGGCAAGTGACAAAGAACCAGTAGAATGCCGTGAAGGACAGCAGTGTGCTCTTCGATTGCTGCCTAGGTC
AACCATGAAGCTGTTCAGCCAATCCCGTATAGTCGACCGTAAACAAACGCGCAACAAAGCAGGTTGCTGCCTACCTAGCCATATGACTCGGAAT
CGTAAAATGTTGCAACCTTCCTTCTTGCTCAGTTATATACCCTTAACAGTCCAGAAGCTTTTTTCTTCCATGATGATAAAAATCAGAAATTGAA
ATAGGCTAACAACAGCAGATCATGAGGTTTAATTTGAAGAGTGTATTACTTCATTGCGCCCTCTCTCCAGCCTTAGGTGGTCCACCATAAGGAG
TAGCTTTATGAGCACCACGGTTATTATTAAAGCTGCTAGTACGTTCTGGAGCAGATCAACTGCCACCATGACGTTTGCCGCCTTCACCGCCGGT
GGAAATTTTATTGTTTTTGATGAGGACTTCAAGTGACATGTCTAAAGATGCACCGGCCATTGTGATTAGTGGAATAAGGGTTTGTTCGGTTAGT
GGATGAAGGCGGTGGAACTCGAAGAAGATCTGGAAACTGATGTCGGTCAAGAGGTAATGACTAAAGAAAGGAACAGGTGAGAACTGAGAAGTGT
GTGTGTGTGGTGGATTCTAGAGAATAACTGAAGGGGGTGAAAATATGGACTCGGGCTTTGGATAATAAAGAATAAAACGGGCCA

Primers for UN90349 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1TTCGGTTAGTGGATGAAGGC 60.07420ATTATCCAAAGCCCGAGTCC 60.28620170 16831852
2TGGAAACTGATGTCGGTCAA 60.08820ATTATCCAAAGCCCGAGTCC 60.28620130 17231852
3ATGTCTAAAGATGCACCGGC 60.10320ATTATCCAAAGCCCGAGTCC 60.28620217 16361852