Simple sequence repeat (SSR)
| >UN05291 ATTAACATCACAAACACCTTTTATTACATATTTGATACACAATAACAAGGGTTTACATAACCCAATAACATACCCATTAACATCTCTAATCATC ATATTTGATCATATGATGAAACCTCCAATTTAACCATATTAAACATACATCTACCATCTTTAATTTAGATCAAAACTCCTTCGATTTTGTTAGC AAGTTCCTCCAGATCAAGTACGGGTGCTTCCAGTGTCTCTTCATGCATTATATTCAAGTCTACGCTATAATCGACACCTTCCTCAGCTGTTGCA GCTGCTGCTGCTCTACTCTCTTGAACATGCATGCTCGATATACTGTCTGTAGATTCAATATCATCCGGTTTCACATCTTCAAAAACAGCCGTAT CCATGGGCTCTGAAATCTGTCTTTCCGCGGATGAATTTACAGATATACCAATACCAGTACCAGTACCGGTACCAGTGGTGGAAGATGCATTTAA AGGTGAATCACCGCCTGCTGCTGCATAATGCTCAACTTCCTCCCTCTGTGAAGTCATGCCTTGCTTTGATGGAAAGATAAGTTGTGCGCCAGAT GCAGTCTGACCGTCCATGGTAGGCAATGTCCAGCCTTTTCTTTGGGACCACTCTAAGGATGGGCGTAAATCCTTGCAGAATGCTATAAGTATAT CGTCTGATCCTTCTCCTGCTGGAGGCATTGGCAATTGAAGCTGAACCTTGTCGTCGCTCAACACTTCGATAATCCTAGCAGACCAAAAACAGTC ATCTTTATCCCAATCTACCATATCCCCAACCTTCCAAGCACCATCAATAACAACACATATTTCTGAAATTGAGTTGACAGGAGGCACTTCACTT TTGTGATACAGTAAAGGATATTGAGGGCGCAACATCAGTTGTTTCTTTTTCAGGCTAGACTTTCTAGCGTGAGGAGGAACTTCATATATCTTTT TCCATGTTATCTCTTGTTCAAAATCGTAGTAGTCCAGCTTTATCTTGTTCTTTTTAAAGTCAATATCGAGGACCTTGGTTCTGAACCAGGCACC GCGGAATCCTTGTTCGAAAGTCTTCATTTCAACGAGTTGCCCCACTTCTAAACTCAACCTACCACCACCCTTTTCCTTTTCCTTTTCCATTGCC CTCCCTTCCTTCCTTCCTTCCTGCCTTTAATGAATGAATTAATTAATTCGGTCAGTCAGTCAGTCAGTCAGTCAGTCTGAAGAAGAAACTAACA TTCATTCAATCCCCTTTTTT |
Primers for UN05291 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ACCTACCACCACCCTTTTCC | 60.088 | 20 | AAAAAGGGGATTGAATGAATGTT | 59.949 | 23 | 151 | 1091 | 1241 |
| 2 | ACCTACCACCACCCTTTTCC | 60.088 | 20 | AAAAAGGGGATTGAATGAATG | 57.91 | 21 | 151 | 1091 | 1241 |
| 3 | CCTTCCTTCCTTCCTTCCTG | 60.175 | 20 | AAAAAGGGGATTGAATGAATGTT | 59.949 | 23 | 110 | 1132 | 1241 |