Simple sequence repeat (SSR)
| >UN90004 CAAGGGCGGCTTCTTTGCGAGGAATAGAGCCGACAATGGAAGGGGAAAGAGAGACGTCCCTGGCACCAGCGATCATAGCTGCCTCACTCCAGCC CAGCTTAAACACGTATGGAAGAGAAGCGGCGAGCACTCGAGATTGTTCCTCTTGGTAATTACTAGCCCTTGTAGTTCTTCTTGTTCCTCCTCCT TGGCCTGTTGTTGATGCATTATTATCACCAAACACTCGTTGTTGGCTTGTTGATGAAGAATTGTTTTGATCGACGAAAGGCGGTGGTGGTTCTG TCGATAGAAACCGATTTTGATAATAACAACAACCACCAAATGAATAATAATAATAAGGAGGAGGAGGAGGGTTTGTTGTTGTAGTTATTATTCT TCGAATTGGACTAATGCTTTGTTTACCGTGTAATGATACCAACAATGATTTTGATTTCGAACAAGAAGAAACCAACCGTTTTGCTGCTGCTGAT CGATACATTTCTTCTTCTTCTTCTTTGTTTGTTTTGGTGGTTGTTTTTGAGTTTGGGGCTTTTGTTACTTCCACGTTAGTTTAGTTAGATT |
Primers for UN90004 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CTCCTTGGCCTGTTGTTGAT | 60.111 | 20 | CAGCAAAACGGTTGGTTTCT | 60.147 | 20 | 279 | 184 | 462 |
| 2 | CACTCGTTGTTGGCTTGTTG | 60.338 | 20 | CAGCAAAACGGTTGGTTTCT | 60.147 | 20 | 242 | 221 | 462 |
| 3 | CTCCTTGGCCTGTTGTTGAT | 60.111 | 20 | GCAAAACGGTTGGTTTCTTC | 59.592 | 20 | 277 | 184 | 460 |