Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN89513
CTTAGAAAAACCTACTCAAAATCCTTATTTCATTCATTTATTCATACTGACAAGTAAAAAAAATAAGGCAAAAGTACCACCAACTTCAGTTCCG
AGAGCAGTTGTTCGATAAAATCTACATGCAGCTCTGCTTATTTCAACTCTCAAGACACAAAATGCCCAAGGAAAACCCGAGCGATGCAGAAATA
ATTATAATAGCTAAACACAAATGGATATTGAACAACACCCTTTGAATAATAAATAAATCAAACTACTAACAACAAACCCTTTCTTTCATGATGC
ACCAGGAAACAGCACACCCTCCCCGAATGGCTCCACGCTGACTCTGACACTTAACACAGATGAAAATCGCCACTGGGTTTCATCTTCAAATAAC
GTAATTACGTGTCCTGTGTTTACCGGGTTTCATCCTCAAGGTTGCGGAAACCAGCAGTAAGATCTTCGTATAGCTTCTTGAATTTTCCAGTAAG
AACATCCTCGCCTTCAGCTGGGTCCTCAAACTTCTGAGACACTAATCGGTAAAATAGATCACCCAAACGATGTTTGATGAGTGAGTAAGTAATC
TTCTGGCCATCCATGCCAGCTCCTCTTTCCACAGACTGGTTGGCTAGATTGTAGAAATGGATAATATTACGCATCATCCATACAGACTTGTAGA
AGGGGCAGTACTTATCATATGGTGTAAATGCATTTTGAGCAAGATAGTCTTCCCTCAAAAGTTTTGCAGTTTCTAAGGTAATCTTATCTGATTC
AGCCAAAGCATCTTTACCCACAAGCTGGACAATTTCATTAAGATCATCTTCTCTCTGGAGCACCTCACGAGCCTTTGTCCTAATGTCGATGAAA
TCTGAATCAAACTTCTCATAGAAGGATTCTAGAGCCGTTGAGTACTTTGAGTAGGAGATAAGCCAGTTTACAGATGGAAAATGCTTCCTCTGGG
CAAGCTTCTTATCTAAACCCCAGAAAACCTGAACAATACTGAGGGTAGCAGATGTAACAGGATCTGAGAAATCTCCACCAGGAGGAGAAACAGC
ACCAACAATTGTGACACTACCATCACGTTCTGGTCCACCAAGACACTTTACTTTACCAGCACGTTCATAGAAGGATGCCAAACGTGCTGCCAAA
TATGCAGGATAACCACTATCTGCGGGCATTTCTGCCAGACGACCAGAAATTTCACGCAATGCTTCTGCCCAACGTGAGGTGGAGTCTGCCATCA
TACTGACATTGTAACCCATATCTCTGAAGTATTCAGCAATGGTAATTCCTGTATAGATTGAAGCCTCACGAGCAGCCACAGGCATGTTAGAAGT
GTTGGCCACAAGTGTTGTACGCTTCATGACAGATTCTTCACGTCCGTCAGGCAATGTCATTGTCAATTGAGGGAAATCCATAAGAACTTCTGCC
ATTTCATTTCCTCTTTCTCCGCAACCAACATAAACAACAGTGTCCGAATTTGAGTACTTAGATAGAGCTTGACTAATAACGGTTTTACCACAGC
CAAAAGCACCAGGAATGGCACATGTCCCACCAAGCACAGAGGGGAAAAGGGCATCAAGAACACGCTGTCCAGTAAGAAGAGGAGTATCAGCAGC
AAGCTTTGATGCAACAGGCCTAGGAGTACGTACGGGCCAAGTCTGAAGCATGGTAAATTGCTTTTTGACACCTTGAAATTCAAGCTCCAAGACA
GTGTCCTTTAATGAGTATTGACCAGCTGGTGCAACATATGTTACTTTTCCCATGGCATCAGGAGGTAGAGCAATGCGGTGTTCCACTAAACTGT
TCTCAAAAACAGTAGCATATAGATCTCCACCTGTGATAGTATCTCCCTCGCCTATTTTCTTTGGCTGGAATTCCCAAAGTATATCCTTGTCAAG
AGCTGGGACAGATACACCACGGGGAATGTACACATCCTGTGATATTCTTGCGATAGTCTTCAAAGGCCTCTGGATACCATCAAAAATGTTCCCC
AAAATTCCAGGGCCCAACTCCACGGATAGAGGCTTGTGTGTTCGGAGAACCGGATCATTCACCATCAGCCCAGCTGTTTCTTCATAAACTTGGA
TGGTAGCAGAATCTCCTTCCAAACGGATAATCTCCCCAATAAGGTTGTCATGTCCAACACGAACAAGTTCGTACATAGCAGCCCCGTTCATTCC
ATCTGCAATGACGACGGGCCCTGATACCTTACGGACGTAACCGCACTCGCTCTCCTTCTCGGAGTCTTCGAACGTCGTCAATCGAGCACCGTAT
GCAGACGGCATGATTGTTATTATTAGATCGGTATGAACACGATGATGATGATGATTGGTGGTTCAGAAATGGTTATTATTACAGAGACGTGTAT
ATAATAATAGTGATGAGGAAGAAAAAATACAATCACAATCAGTTGTG

Primers for UN89513 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1TACCTTACGGACGTAACCGC 60.01820CACAACTGATTGTGATTGTATTTTT 57.2925211 21872397
2GTATGCAGACGGCATGATTG 60.10420CACAACTGATTGTGATTGTATTTTT 57.2925145 22532397
3TATGCAGACGGCATGATTGT 60.10420CACAACTGATTGTGATTGTATTTTT 57.2925144 22542397