Simple sequence repeat (SSR)
>UN89271 GCCATTTTGGAGCTTCCACTAAATACCTTATATATGAATGATTTTATATATACATGGTCTATATTTCCAAATGACCCGTTTAACAGTAGTTCAT CATGTCACCATTTTCTGAGAAACTACGAATATAAGAACTGCACTTACTTTATGCATCTTTATAGGGTGTTTGGGCTTGCTTATTTAAAGGTTGA ATTTATGCTTACTTTGGTTCCACTTGGTGCCTTTGGTTTAATCTCAACTGGCTTACACTGTTTCACAGCTTCCCCGGAATCTTCCTCTTCTGGT ATAGCTTTGACTTCTTGAAATTCAAAGATCCACTTGCATAAGATCGTGTGGGCTCTAACACAGAACACCCTCTGCCGCCAGCTTCACCGCCTCT TCTTCCCATCGGATATAAGAAACCCGCCGGCAAATCAAGACTTTAATAACCCTCCACTCACCTCAATTCTCTCTTCTTTTTGTATATCATTTTT TGTGGGGTTGATCGAACCATATATTCATTTTTAAATAAAAGATATCAAAAAACTCCAATTTTGAGAAAAGGTATGCGTGTTTTTTTTAGTGGTT TTGGTGTGAAGAAGATTCATGAAGAGAATAGAGGGCAGTGGGATTTATGAGAGAGAGAGAAGAGAAGATTCAAGAAAGTAGCTGAGATTTTTTA GAGGCTGATTGATATTTGTGTGTGAGTGAAAGTTCTGGAGAGATAAAGATGAGAGATATACTACAAAAGAAGCCTTAGAAAACGTGTACTGTTC ATTGGTGTTGGTAGCAGCAACCATGGTAGCCAATCATAGGCTGCCATGTATAACAAATGCTTCTAATGACAATGCACCAACCAATAGAATGTGA GATTAGGATACTAATTACCATATAAACAACTTACTTTGTCTCACCCACACAATGCCTTTTAGTATATACGAGTGTTTTATCCCGCGCGTTGCCG CGGAAGAGTTGTGTTAGACGTCAAATAGAGCAACAGATATTACTAAAGAGACAATAGACTTCGGCCAACATACCATAGTCAAAGAAGCCACAAA GTCCAATGTATTTTCTGTGATGTGTTGGTCTATTGGATGTAGTGAAGCCGGTATGTGCAAGCTTTCTTGAGATGATAAATTTTTTTCAATACTT CTCAAGTGTTGCTGAATAGCATGCTTCGGAAATAATAACTGTCTTTCGGTGTTCTCGCATTCATTGACACATACAACAGCAACTGGAAATGGTT CCTTCATTGGCATCTAATAACTACCACTTATATTCCAATCACATGCATTGGCGCTCCACCAAACGTGCTGAAATTCAAGGTGATTGATAGTAGC AAGAATGGCAAGACTATTGTAACCGAAACAAAAGTGTCAACTCCCAGTTTCTGCTGCCATGTACAGTGTAACCGAGAAGCCCTCGCTGTCAATT GTTTTATGACCATGAGTTGTTAAATGTTTAACTGGTTTTTTCACGGGAACCACTTCACTGCTGTCGTTTTGTTTCATCAGTAATTGTGTGCCAC AATTGAACTCTCTTCCTGCT |
Primers for UN89271 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GAGAATAGAGGGCAGTGGGA | 59.239 | 20 | TTGGTTGGTGCATTGTCATT | 59.823 | 20 | 249 | 588 | 836 |
2 | GAGAATAGAGGGCAGTGGGA | 59.239 | 20 | GCTGCTACCAACACCAATGA | 59.722 | 20 | 183 | 588 | 770 |
3 | AGAGAATAGAGGGCAGTGGGA | 60.219 | 21 | TTGGTTGGTGCATTGTCATT | 59.823 | 20 | 250 | 587 | 836 |