Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN89259
CACACAAAAGCTCCATATTTCTGATGTCCAAACAGCCAAGTTTCTGCCATATTCCTGCTGTCCAAAGGGCCTGAATTCTGCTGATGATCCATCA
TGGCTTGGTACTTGTGTAGAGGTACTTCATACTGGCGAATATTGTTCATCATCTTTTTGACCTTCCTACTGATTGAACACAACATACCGCTGCG
AGAAGTTTAATGGAAAGAGTACACAGGAAGCGTCTCGAGTAGTGTATCCAACGGCCTTCACTGAATGCTCCATATCTGGTGAACTGGACATTCA
CGATCACTATGTGCTAGTTTATTTCGCGTTGGCTTCATCTTCTGTCTGGGATCAGTCCCGTCAGCATTAATGTTACCCTTCTAAGCTCTTTAAG
TCATCAATGTATCATGATCATCAACTCTCTAAATCAATTACAGTAGTCGGAACTTTGGTTCCACTTGGTGCCTTTGGTTTAATCTCAACTGGCT
TACACTGTTTCACAGCTTCCCCGGAATCTTCCTCTTCTGGTATAGCTTTGACTTCTTGAAATTCAAAGATCCACTTGCATAAGATCGTGTGGGC
TCTAACACAGAACACCCTCTGCCGCCAGCTTCACCGCCTCTTCTTCCCATCGGATATAAGAAACCCGCCGGCAAATCAAGACTTTAATAACCCT
CCACTCACCTCAATTCTCTCTTCTTTTTGTATATCATTTTTTGTGGGGTTGATCGAACCATATATTCATTTTTAAATAAAAGATATCAAAAAAC
TCCAATTTTGAGAAAAGGTATGCGTGTTTTTTTTAGTGGTTTTGGTGTGAAGAAGATTCATGAAGAGAATAGAGGGCAGTGGGATTTATGAGAG
AGAGAGAAGAGAAGATTCAAGAAAGTAGCTGAGATTTTTTAGAGGCTGATTGATATTTGTGTGTGAGTGAAAGTTCTGGAGAGATAAAGATGAG
AGATATACTACAAAAGAAGCCTTAGAAAACGTGTACTGTTCATTGGTGTTGGTAGCAGCAACCATGGTAGCCAATCATAGGCTGCCATGTATAA
CAAATGCTTCTAATGACAATGCACCAACCAATAGAATGTGAGATTAGGATACTAATTACCATATAAACAACTTACTTTGTCTCACCCACACAAT
GCCTTTTAGTATATACGAGTGTTTTATCCCGCGCGTTGCCGCGGAAGAGTTGTGTTAGACGTCAAATAGAGCAACAGATATTACTAAAGAGACA
ATAGACTTCGGCCAACATACCATAGTCAAAGAAGCCACAAAGTCCAATGTATTTTCTGTGATGTGTTGGTCTATTGGATGTAGTGAAGCCGGTA
TGTGCAAGCTTTCTTGAGATGATAAATTTTTTTCAATACTTCTCAAGTGTTGCTGAATAGCATGCTTCGGAAATAATAACTGTCTTTCGGTGTT
CTCGCATTCATTGACACATACAACAGCAACTGGAAATGGTTCCTTCATTGGCATCTAATAACTACCACTTATATTCCAATCACATGCATTGGCG
CTCCACCAAACGTGCTGAAATTCAAGGTGATTGATAGTAGCAAGAATGGCAAGACTATTGTAACCGAAACAAAAGTGTCAACTCCCAGTTTCTG
CTGCCATGTACAGTGTAACCGAGAAGCCCTCGCTGTCAATTGTTTTATGACCATGAGTTGTTAAATGTTTAACTGGTTTTTTCACGGGAACCAC
TTCACTGCTGTCGTTTTGTTTCATCAGTAATTGTGTGCCACAATTGAACTCTCTTCCTGCT

Primers for UN89259 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GAGAATAGAGGGCAGTGGGA 59.23920TTGGTTGGTGCATTGTCATT 59.82320249 8171065
2GAGAATAGAGGGCAGTGGGA 59.23920GCTGCTACCAACACCAATGA 59.72220183 817999
3AGAGAATAGAGGGCAGTGGGA 60.21921TTGGTTGGTGCATTGTCATT 59.82320250 8161065