Simple sequence repeat (SSR)
| >UN89111 TAACTAAAGAATCAACTTTTTTATTTATTACAAAAACTTCTCATATTCAAGCTATAAGAGTTTAGTATACAATTTATTCTACAGCTATAAAATA TACATAACCAAACAGACATATTTAACCTTCACAACTCATGTGGCCATAATACAACCTCCAAATTGGGTTCTTTCATTTGGCCTGTTTGGCATAT CGACATTTCCACTTTCTTTTTCTTTTTTTGTCAATACGATTTCATCGGCGAGAGCTGACCAGGCCGGCCTCCTCCACCGGGCTTCTTGTGGAGC GGAGATTGATGGGCAGATTGATAACGACGAGGGCCTGTAGTTTGGGTTGTATGGACCTTTGTCTCTCTTGGTTTCGCTTTGATGGCACTAATCT CATGTAATTTCACTACAACTTCTTCCATAGAAGGTCGGTTTTTGGGGTCCGCTTCTAGACAACTTAAGATGAGCTCTGAGGCTCTGATAGCTCC TTTTGATGGGAAATCATGCTCTGGTAGCTTCGGGTCTAAGATCTTTCGTAGCTTCCTTTTGTCGGGCAATGCAGGTCGAGCCCAATCCACCAAA TTATGTTGTGAGCCAGGTCGATTAGTGTCAAGTACACGTAGACCCGTTATTAGTTCTAATAGTACAACTCCAAAGCCATAAACGTCGCTCTTAA CATATAAATGACCGGTGGCGATATATTCTGGAGCTGCGTAACCATATGTACCGACTACACCAGTGGAGACATGAGACTCGCCGTTTGCAGGACC TAACTTTGCTAGTCCAAAATCGGAGAGCTTCGCATTGAAGTCCCCATCTAATAAAATATTTGCAGACTTAAAGTCCCTATAAATAACAGTTTTT TCAGTTGTATGCAAAAAAGCAAGGCCTTGTGCTGCTCCAGTTGCTATTTTAATCCTTGTGGACCATGAGAGTGGTTCTGCACCTTTTTTGAAAA GATGATTTTCAAGACTACCCTTTTGCATATATTCATATACAAGAAGGAATTCTCTATCCTCCCAACAATATCCAACAAGTTTTACAAGATTTGG ATGGCTGAATTTTCCCAAAAATTTCACTTCTGCCTGCCATTCTTTTAGTCCTTGAGCACTGTCCGGACTTGATTTCTTGACAGCCACGGCTATC CCAATTCCGACTTTCGACGGAGCGTAAGTTTCTCCGTCCACCCATCCTTTGAAAACCCTACCAAAACCACCTTCTCCTAGCATGGTATCAGGCC GAAAGTTTCGTGTCGCGGATTTTAGCTCAGCAAACGTGAAACATTTTAAATTTGGTGTTACTATTCGCCCACTTGCTGGCAGTGGCACTGATTC TTTGCCACTGCCACTGTCGCCGCCTTCTTTCGCGGCGTTAGATGGATGTTTTTCAATCATGGGTTCTTTCTTTTTCTCATCATTGATAGTAACT GCTTGTGTTGGAGCTTTATTGGTGTTTGATGAGAAATTATTAACAGGTTTTGGATAGCAATTTCCCATCTAACTCTCTCTCTCTCAAACACACA CTCTAAACACACACAGTGTGAGAGAGAAACAAATTTAGATGAGTTAGGGTTTTAAGGTGGTGTTATTTTTAGAAAGAACAAATTTTTGATGATT CAAAGTTTCTTGGAAAGTGGAGAGAAAGAGAATGGAAAGGAGGGGAGAAA |
Primers for UN89111 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GGTTTTGGATAGCAATTTCCC | 59.672 | 21 | TCCCCTCCTTTCCATTCTCT | 60.008 | 20 | 189 | 1456 | 1644 |
| 2 | GGTTTTGGATAGCAATTTCCC | 59.672 | 21 | CTCCCCTCCTTTCCATTCTC | 60.008 | 20 | 190 | 1456 | 1645 |
| 3 | GGTTTTGGATAGCAATTTCCC | 59.672 | 21 | TCTCCCCTCCTTTCCATTCT | 60.008 | 20 | 191 | 1456 | 1646 |