Simple sequence repeat (SSR)
| >UN05145 CTGGGCATGAATAAAGAAATCCTTTAAGGTCACATACACAACTCAAGTCTAAATATATATGTCTCTGTAAGGCTTACAAAGTCACTTTACAGTA TAAATAATTTCTATCAGAGTTTTGTTGCCCCCATCAGGCGTGTTGTTTACTACAGTAATATTTATTATGAACATGATACACAAATCAGGAACAT ATAACACGGCCCTTATCACCTATCGGTGGCTTATAATGTTTTCAACCCTCTTATAACAAAGAAAGTTCACCATAAGAAGTTTCTTCTCGACTTC GGTCGGAAATCCTTTTTGCTGAGGCACCAGGAATTAGGGAAGGTGCTCAAATTGCTGAGAAGCTTTGCCCCATGCCATGCAGAATCTGCGCCAT ATGGAGGTGGAATAACTCGTATTCCATTGGATATGGATGGTGGAAGAAGAACATGCAGTTCCTTATCTAATCTTTCTACTATTCCTGGTAAACA CGCGCTACCCCCAGCTAAGACAATGGTCTTGAACCAAGAATCATCGGGGGTTAAACCTGCAGCTTGGCAATGTTCAATGCAATTGGCCACGGCT TGATGCAAACCCATTGCACTCAATCCTGAAATACGGGGCTGAAATAAAATCTCTCCTGTTCGAAAGCGCTCTTGCTTAAGACTAAACCAACCCT CAACAGGAACTTCATACGACGCTTCTGTATCTTTCCTCAATTCGGCATCATAGTCCAAAGCAACATAACAAAGGTTCTCTTTTAATGCTCTCAC TGTGTATAACGAAGAAAAGGGTAGATTTCTTTGCTGCATTTGCTCCCTAAGGTATGCTGTAAGCTTTACGGCCCCAACTTCCATAACTTCCACA CCCACTTTGTACATTATCTTACCATGCAAAATTGGTACAACAGATGTTTGATTAAAACCAATATTAACAAGGATTCCTGAAGTTTTTCTTGCTG CAAACAAAGCTAGAGTTGCCTGACTGACTGCACAGACAGAAGGAACATTCATGTCAAACATTGCTGAGTGGATGGCTTCTTTAAGTTGCCTTCT AGCAGTTTTAGCAGCTTCTGTATCACCACAATGAGTAATTGGAATTGAAACAACCGTTGGCTGTGAGGATGATTTCACCTGCATCCTGCTATAT ATTGTTGCATAAAAATGGCGAAGCCTAGAGTACAATGGAGCCTCGATATTACCAAATTCCAAAAATGTTGCAGCTCGCCCAGATGGAGAATTAT ATTTGCTCCAACCAAATTTGCAGTAGCCCGAACCACCATCAATGATAATAGCTCCAGGAACCTGTGCTCGCTGACCATAAATTTGCATAAATGA TTGCATCTGAGAAGGATATGTTCTGCTGAGAGGATATCCGCTCCTTAAACTGGTTTCGGCGAAAAACATGGAATCATAAGGATCATTGTTATCA TTCAAAAAAGCAATCCACAACATATTATCACTAACAACCAGCTTCCATGACTTACATACAACACTCATCTTAGCTACATCTTTAGGTCCAATCA ATTTCAATATCTGCATAAGCACATCATATGGTATCCGATCAAATTCACCGATCGATGTTGATGATGATGATGAACAACATATGATCATTTTCTC AGATGATTGGACTGGTTCATTATTTGAAGATGATGAGTTTAACCGCGCTGTTGCGGCTTCGAGAAGCTTCTTGAGAAGATATGACATCGCCGGA AATGGCGGAAATCTGGCCGG |
Primers for UN05145 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GGCGAAAAACATGGAATCAT | 59.768 | 20 | AACAGCGCGGTTAAACTCAT | 59.775 | 20 | 277 | 1374 | 1650 |
| 2 | GGCGAAAAACATGGAATCAT | 59.768 | 20 | AGCGCGGTTAAACTCATCAT | 59.736 | 20 | 274 | 1374 | 1647 |
| 3 | GGCGAAAAACATGGAATCAT | 59.768 | 20 | ACAGCGCGGTTAAACTCATC | 60.278 | 20 | 276 | 1374 | 1649 |