Simple sequence repeat (SSR)
>UN89003 CATAATTGTTTATGCAATTGCTGCTCTCGAATGGAAGGAATTACGAAAGGACCCACTAATTGTCTAAGAAAAGAACATACATATCAGTCACATA TATATGAGCAACATAATTGTCTGTAGCCAATTTGAAACCACATTTCAATAACACTTTAGCAGTAGACCACATTTCAACTTACTCGTAGTCAAAA AATCTGCAACAAACCCGAGTTATTCACAGAACTCTTGACTTCTTCCATCAGAATATTTCATTCGTTTTCCTTTATGTATGTCTATTTCTTTCCC TTCTATCTCTGTCACTCATCCCTCTGATAATTCCCCATCTAAAATATGGTTCAGTAGCTTGTATTGGAATTTCTGCACCACTCTTTCTGCAAAA GCTCTCAAAAGATTTGAGTAGATTCTTGAAATGAGCTTGTTGACTTAAATCTTCAAATTTGATCTTTCGCATAGTGAATTTTTTTTTACGGTCA CATTTGTCACATGCGCGTCTCTTCCAAATACTCACGGCCTCTTTCTTGATTTCTTTCTTAAGTTCACTGTGCTTTCTTGCTGTGCACCTAAAGT GCAGCATATGACTTAAAGGCACTTGTTGTAGTAGTTCTTCTTGTGAAGTAAATGGGGACCATTCAAGAATTAGCTTCAGATTATTATGCCAATA TTCCTGAGTGCCATAGAGTATATGTTCTGCCCAATGCTTCGAGATATCATAATCAATCATTGGAACAATGACATCATCTTGTCCAGTTATGCGT AGAAATGTATAGGATAAAAGACCAATACTTTGGGTCGTTTGCCCTTTCTGACATGCTCAACTAAAAACAATGACATCGGCTCCCAAACGCATAG TACTCGTCTTGAACCCATTACCATATTGCCCGATTGCGCTGTTACTCTTCTTCGTTGAGTATCCCAATCTCATGCACTTCCGAAGGCCCTCTGG ATTCATTCCACGTCCATCGTCTGCAATTCGGAAAGCTCCTCAAGGAATTCAGGCGGACAAAGATCCGGTCTGGTAGACAGCCCTTGACCAATCT TAACAAAAGTAGGACCTAACCTAGTAAACGTCTCCCTTAACTCAACCGCTCGCGCTCTTCGATTCTTTTCCAACTGACCCCGCAACTGATCTAT ATATAACTTCGCCCCAAATGAACCCAATCCCACAAGAATCTGCAAAGTTCTCCTTAACACCTTAAAGGGACGATTAGCGTATTTAAACTTAAGC AATTCCGGACTGTAGACAGAGGCGTTGACAGCACGCGCCAATGCTTTAGACTCAGCTTGAATATCATCAGCTCTGTTTCTGACTATAGCCGATG ACACGTCACCATTCACAATATTATTAGTTTTAACTGAAGATGAAACCCTAGGTCTGGTATCTTCAACTAAGGCGGCAAATATAGGTTTAGGTCT GAATCTGGTACGGTGTTTGGTGGTGGTGGTGGTGCGACGGCGGTGGAAGACGGTGGTGGAAGCTGGGTTTAGGGTTACGGTGGACATTTGGTGG TTGGTTTGGTGGAAAATGTTGTTAAACAAACTGGCTTCGTTGAAATGAGTGTG |
Primers for UN89003 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATCTTCAACTAAGGCGGCAA | 59.845 | 20 | ATTTTCCACCAAACCAACCA | 60.066 | 20 | 147 | 1375 | 1521 |
2 | ATCTTCAACTAAGGCGGCAA | 59.845 | 20 | CATTTTCCACCAAACCAACC | 60.066 | 20 | 148 | 1375 | 1522 |
3 | ATCTTCAACTAAGGCGGCAA | 59.845 | 20 | CACTCATTTCAACGAAGCCA | 59.84 | 20 | 181 | 1375 | 1555 |