Simple sequence repeat (SSR)
| >UN88790 ATCGGTTTTAAAAGATCCTACAGAATCCCAAGCTAAAAAGTATCAAGTTCCATACAAATTTAATACAGCTACAAAAAATCAGCGAACAAGTTGG AACTTGGAAGGAAGTCTTCACAGAATAGACAAAACTACTCTGGAACAAACATGTTACATATCCCATGCTCGTGCCTAGGTTTAAGTTTAAATGA TATGTCACAAAACAAGAAACATTTAACGTCTACGCATCCCTCTTCCACGTCCACCACGCATGCCACCGCCACCACCTCTACCTATACCAGCTGC AGCGTCTCCTTGTGCACTTTCGGACTTTGGGTTCTTCACTGTTTCATCCACGCTTAAGATTAGGCATGCTGCCTCAGCTGCAGCGTTTATAGCA TTGATCTTTACCACTGCCGGCTCCCACACAAAGTTGGCAAAAGAATCACAAATTCCACCTGTGTTAATATCTACTCCATAGAGAGCACCCTCAC CAGCAGGAAGTGCATGCTTTTGCCTCAATTTGTTAAGTACATCAGTTGCATCGAATCCGGCATTGTCACAAAGTTGTCGTGGAATAACCTCAAG TGCTTTAGCAAAGGCATTTATAAATAACTGGGACTTCCCAGCTATATTACGTGCATGTTGCCGTAGGAATCGGCTTATCTCCATATCTATTGCA CCACCACCAGCGACCACCGTGGAATTCTTCATGGCCCTCCTCACAATCATGATTGCATCATGTAAACTTCGCTCAGCTTCCTCAATAAACTGAT CAGCTCCACCTCGAAGAACAATAGTGGCTGTCTGGCCAGAAGGACATCCACTGAATATGTTGAACCGTTCATTTCCAACTTGCTTTTCCTCAAA CACCTCACAAGACCCAAGAACCTCATCAATAACATTGTTGACTGATGTCTGTACAGTACCGCCAGTTGCAGCTGCAACACGATGCAGATCATCT TCAGCAACTCGACCAGCGCAAAAGATATCTCGGTCTGCAAAATACTGTGTTGCCAGATCACCAATAGCCAGACGCGACAAGACAATTTTGGCAC CACTCTGTACACATTTATCCAACTTATCATATATGATATTCCATTCGGCATCAACTATGGACTGATATTGCAACGGGTCTGAAAGTCTTATCTC AGCATTTTCTTTTTCTGATTTTAATTCTAATTCAATGTTCAACAGTAATATCTTCGGATTCAAAAACTTCTTTGGTTGCTGCTCAAACCCAGCA TATGAAAAAGTCTTCTTAAACGCAACACCATTCACAAGAAACGAATCCCTCATTGTACCACCAGGAACCTTCTTTATCCCAATCATGTTCAATC TATCATCATTTCCAATGGCAATGACAGCATCCACGACCATCTTTGCAAAAAAGTCTTTCTCTCCTCCGATTAGCTTTGATGAAAGCGTCGTAGC AGCACATTTAGCTAATAAGTTTTTCTTTTCATCTAAACTTTTCCCCTCAATGCTTACAGCCAATTTTTCAACCTTCTCAATTGCCATAGATGCA GCGGTTCTGTAACTTCGTATCAAATTTTGAGGATGAACACCATCTTCAATAAACGGTTTAGCCTCTCTCAAAAACTCACCAGCAAGAAGAACCA CAGAAGTAGTTCCATCACCAACCTCGGAATCCTGCGACTTGGCGATATCGACAAGGATCTTAGCAGCAGGGTGAACAATATCAAGAAGCTTCAT AATAGTAGCACCATCATTGGAAATAGTAGTAACACCTCTATCATCATGGATCAGTTTATCCATACCTCGTGGGCCCAACGTTGTACGGACAACA TCAGCAACAGCCATACAAGCATTTATGTTACTTATTAATTGAGGTTTCCCTTGTGATGTGTCTGTTCCTTCTTTCAATAATATTATCTGAGGTT GCATCATGGATGCCATTTTGGATGTAGGGTTTTGAAATGTAACAAGAAGAAGAAGAAGTGGAGTGAAGTAGGGTTTGCTAATGAAGGAAGAAGA AGTTAGATTAAAGGGGG |
Primers for UN88790 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TCAGCAACAGCCATACAAGC | 60.019 | 20 | TTCTTCCTTCATTAGCAAACCC | 59.609 | 22 | 186 | 1787 | 1972 |
| 2 | TTTATCCATACCTCGTGGGC | 59.784 | 20 | TTCTTCCTTCATTAGCAAACCC | 59.609 | 22 | 226 | 1747 | 1972 |
| 3 | ACGGACAACATCAGCAACAG | 59.751 | 20 | TTCTTCCTTCATTAGCAAACCC | 59.609 | 22 | 196 | 1777 | 1972 |