Simple sequence repeat (SSR)
>UN88587 TGTTGATTCGAATAAAAGGGTTACACACACAAGAAAAACATCTGATAAGCAATGTACAAGTGTTGTTCTTTAAATTTCGCAAACAAGTCCAATT CTCACGTATTTCATGCTGTTTCTTTAGTCACCAGGTACATATAATCTCGATTCATACAAAAACACTACATTTCATTTCCATCAACTAAGCAAAC TTGTCTTTGAAGGAAGCACAAGGCCAGTATGAAGTATCTAATCGACTTCAAAAACCATAACATGTCCGTCGCCATTGCCATCCCCATGCAGCCG TAAGTTGTATATATGATCCCTCAACACTTTCACTTCAGATGATTCCTGTACTAATGCTGGAAGTGGCGTTTATCTTTAGGGAGTGCTCCGGGAC ATAGGTTAAGCCTTTCTCCTTAACGCTAATCTGTAAGGAATCTAGAGTAATAATTCCATCGGTAAGGGGTAGTAGCTCAAGCTTGATGGTGGCT GTAGATTGAGATGGAACACAACCTAGAGGAACTCTACTCTGCAACCACAGGTGCGTGCATCCCAGATCACTTCTTGGAAGTACATCAGTGATGG AAACTGTTTGCTCATTAAAGGAGCCCATCTGAGGCACATTGTCATCACTGCGTCTCTGATTTTCTATTATGTTAGATGCTGAACTGAGTCTCTT AAATGCGATACCCTGTTTCCCAGCTGGTGACTCAGAGGAAACATCAATTGAGCTCATAGGTGATGCGGGCGTAGAATTTAAAGACACCACAGAA GGAAGAGAAGTAAATGAGGCCGGAGCAAGCACTGTTAGTGTTAAATCTTCAGATGTCAGATTTGAAGCCTCAAGTGTTAAAACCTGGACAGGTA ATTGAGCAACCCTGTCATCTGAGCCAAGAGTTGGTCTTGACATTTGAGATGCAACAGAGATCAAAAGATCTCTTGACATACGTGGTCGCCAACT TGTTGGCTGCTTGAAAAACAGCCTAGATTCCGTATAGTTGCATCGACATGATACTAGAACTGCATACTTGTCAGCAAGCCTGATATCCGAGGGG CTGTGAACACTTGACACTGCATTTCCAGCCTGCGACTGTGATGATCGAGGACTTCTATCACTTTGACCCTTACTGTTTTTCCATAATGATGTTG CCGGTTTCAAAATGAAGGAGTGTTCTTCCCCTCTCCTGAGGGCTAAGTCTGGCAAGCTATGGTCGTTGCCTGCTTCAATACATGCTATTGGCAA AGATAAAGGGGGTCCACCCTTGGAAGCCTCCTCATGTATAATAGTTATTGTATCCAAATATATCACAATATCTGGAATGTGTGCAGGAGCAACA TTCTTTATCTGAACACAAAGAAGGTCTTCTGTATTGCAATCAGCAGCAAAAGAAGAGATCTCCACAGGCTGTATAATTTCAACTTTCTTCCTCC ATCGTCTACCTGGAATGTAAATGCCTTCTAGTCCACAGCGAACAGAAAACCTTTCTGGCTCCAGCGGCACACCTCGAAAAGACAGAAGTCCTTC AGCTTCACCTTTTTCATCCTTTCCGGACTTATTAGATGAGAATTGATCCTTATCTTCTAGATCAATGCTTGATTTGGTAGTAATGGGTGAAACA GGTGGAATGGTGTTTGGAGGAACCGAGGACATGGAATAACTTCTGAAGTTACCAAACGAAAAGATCGGAGAAGCAGATGAGCCTGAGGGATTGA TCTTTGTCGATGTGGTACGGACAGTAGAACTGGAGCTCAATTGCGGTGGAGATAAGGAACGAGATGGAGAAGGCAAAGAATTTTCTAAAGGAAG CAACCACTTCAACAGATCTCCACAAGGGTCCTGATTTGAGTAACTTAGGCTTTCTGCAGTCCCATAAGTCAAAGCTCTCTCCTGATATTTTTCG AACTGAATGATTTCTAAGACTGGATCTTTCAAGCAGTCTACACCAATGTTTACCTGTAAAAGTACCTGCATCCACTATATCTCCATTAGCAAGT GAGCTACACTTAAAGCCGTTTCGCGCCACTCCACCCGAGGTACTAGCATCAGCACTTCCCCCCATGTCATCCGAAGCATTAAGGACACTCTTAT CAACGCCCTTTCTGGATTCCACATCATATGAAGTGAACTTCCCTCCAATCATTTCTGTCGACTCTCGGAACGTTTCTTGGGTTTTTCTTTTTGA CCAAAGGGGTTCATCTGCCTCAGCAGTTCGTGCAAAAAAATGGGAGTTCCTAAATCTTTCCAACAACATTTCGGTCTGCCGTCTGTAATCCTCC ATTCTAAGAAGAGATTCACCATGTGTAACTTGACCATTTTGGTTTTTGGCGTTTTTACTCATCATTTCGGCGACCTTAAAGGGTGTGATAATTT CCGTGTCCTGCTTACACGCAGATAAGCATGCTAGTATATGCACTTGTTCTCCTGGGAAAACAAAGGATCGGTCGAAAGATTTAAAAGAAAGAAT ATCGGGTTCTTCATTCCATGTATCGGGAAGTTCCTTGCGTGGAATGGTGATCCATCCTTCGTGTTGAGAAACATCAATATGTTTATCATCGACA ACAACAGGCGGTTGAGAAGGAGCTGCTGTTGTTCCATTAAAAGTATCATGATGAATCAAAGAAGCTAACGGAAACGGATCTTCAGTAGCAACAT TGTCTAAAAAAGGCTGCTGAGGTTGCGGGACGGGTGGAGGCTGCGGAAGAGGTTGTTGTTGTTGTTGAGCTGCAGTCGATGATTGGGACCGCAG CCCCAGAAAATTCATTGCCTATCTATTAACCACTTACTTTTATCTAATCGGAGATGATGACGTCAGCACCTTGTTCTTGTTGTTCTTCTTGTTC AATTTGTTGGTCTGTAATTAATTTGTTTCAGATCTGT |
Primers for UN88587 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GAAGGAGCTGCTGTTGTTCC | 59.997 | 20 | CAATGAATTTTCTGGGGCTG | 60.439 | 20 | 190 | 2554 | 2743 |
2 | TGATCCATCCTTCGTGTTGA | 60.048 | 20 | CAATGAATTTTCTGGGGCTG | 60.439 | 20 | 252 | 2492 | 2743 |
3 | AGGAGCTGCTGTTGTTCCAT | 59.874 | 20 | CAATGAATTTTCTGGGGCTG | 60.439 | 20 | 188 | 2556 | 2743 |