Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN88587
TGTTGATTCGAATAAAAGGGTTACACACACAAGAAAAACATCTGATAAGCAATGTACAAGTGTTGTTCTTTAAATTTCGCAAACAAGTCCAATT
CTCACGTATTTCATGCTGTTTCTTTAGTCACCAGGTACATATAATCTCGATTCATACAAAAACACTACATTTCATTTCCATCAACTAAGCAAAC
TTGTCTTTGAAGGAAGCACAAGGCCAGTATGAAGTATCTAATCGACTTCAAAAACCATAACATGTCCGTCGCCATTGCCATCCCCATGCAGCCG
TAAGTTGTATATATGATCCCTCAACACTTTCACTTCAGATGATTCCTGTACTAATGCTGGAAGTGGCGTTTATCTTTAGGGAGTGCTCCGGGAC
ATAGGTTAAGCCTTTCTCCTTAACGCTAATCTGTAAGGAATCTAGAGTAATAATTCCATCGGTAAGGGGTAGTAGCTCAAGCTTGATGGTGGCT
GTAGATTGAGATGGAACACAACCTAGAGGAACTCTACTCTGCAACCACAGGTGCGTGCATCCCAGATCACTTCTTGGAAGTACATCAGTGATGG
AAACTGTTTGCTCATTAAAGGAGCCCATCTGAGGCACATTGTCATCACTGCGTCTCTGATTTTCTATTATGTTAGATGCTGAACTGAGTCTCTT
AAATGCGATACCCTGTTTCCCAGCTGGTGACTCAGAGGAAACATCAATTGAGCTCATAGGTGATGCGGGCGTAGAATTTAAAGACACCACAGAA
GGAAGAGAAGTAAATGAGGCCGGAGCAAGCACTGTTAGTGTTAAATCTTCAGATGTCAGATTTGAAGCCTCAAGTGTTAAAACCTGGACAGGTA
ATTGAGCAACCCTGTCATCTGAGCCAAGAGTTGGTCTTGACATTTGAGATGCAACAGAGATCAAAAGATCTCTTGACATACGTGGTCGCCAACT
TGTTGGCTGCTTGAAAAACAGCCTAGATTCCGTATAGTTGCATCGACATGATACTAGAACTGCATACTTGTCAGCAAGCCTGATATCCGAGGGG
CTGTGAACACTTGACACTGCATTTCCAGCCTGCGACTGTGATGATCGAGGACTTCTATCACTTTGACCCTTACTGTTTTTCCATAATGATGTTG
CCGGTTTCAAAATGAAGGAGTGTTCTTCCCCTCTCCTGAGGGCTAAGTCTGGCAAGCTATGGTCGTTGCCTGCTTCAATACATGCTATTGGCAA
AGATAAAGGGGGTCCACCCTTGGAAGCCTCCTCATGTATAATAGTTATTGTATCCAAATATATCACAATATCTGGAATGTGTGCAGGAGCAACA
TTCTTTATCTGAACACAAAGAAGGTCTTCTGTATTGCAATCAGCAGCAAAAGAAGAGATCTCCACAGGCTGTATAATTTCAACTTTCTTCCTCC
ATCGTCTACCTGGAATGTAAATGCCTTCTAGTCCACAGCGAACAGAAAACCTTTCTGGCTCCAGCGGCACACCTCGAAAAGACAGAAGTCCTTC
AGCTTCACCTTTTTCATCCTTTCCGGACTTATTAGATGAGAATTGATCCTTATCTTCTAGATCAATGCTTGATTTGGTAGTAATGGGTGAAACA
GGTGGAATGGTGTTTGGAGGAACCGAGGACATGGAATAACTTCTGAAGTTACCAAACGAAAAGATCGGAGAAGCAGATGAGCCTGAGGGATTGA
TCTTTGTCGATGTGGTACGGACAGTAGAACTGGAGCTCAATTGCGGTGGAGATAAGGAACGAGATGGAGAAGGCAAAGAATTTTCTAAAGGAAG
CAACCACTTCAACAGATCTCCACAAGGGTCCTGATTTGAGTAACTTAGGCTTTCTGCAGTCCCATAAGTCAAAGCTCTCTCCTGATATTTTTCG
AACTGAATGATTTCTAAGACTGGATCTTTCAAGCAGTCTACACCAATGTTTACCTGTAAAAGTACCTGCATCCACTATATCTCCATTAGCAAGT
GAGCTACACTTAAAGCCGTTTCGCGCCACTCCACCCGAGGTACTAGCATCAGCACTTCCCCCCATGTCATCCGAAGCATTAAGGACACTCTTAT
CAACGCCCTTTCTGGATTCCACATCATATGAAGTGAACTTCCCTCCAATCATTTCTGTCGACTCTCGGAACGTTTCTTGGGTTTTTCTTTTTGA
CCAAAGGGGTTCATCTGCCTCAGCAGTTCGTGCAAAAAAATGGGAGTTCCTAAATCTTTCCAACAACATTTCGGTCTGCCGTCTGTAATCCTCC
ATTCTAAGAAGAGATTCACCATGTGTAACTTGACCATTTTGGTTTTTGGCGTTTTTACTCATCATTTCGGCGACCTTAAAGGGTGTGATAATTT
CCGTGTCCTGCTTACACGCAGATAAGCATGCTAGTATATGCACTTGTTCTCCTGGGAAAACAAAGGATCGGTCGAAAGATTTAAAAGAAAGAAT
ATCGGGTTCTTCATTCCATGTATCGGGAAGTTCCTTGCGTGGAATGGTGATCCATCCTTCGTGTTGAGAAACATCAATATGTTTATCATCGACA
ACAACAGGCGGTTGAGAAGGAGCTGCTGTTGTTCCATTAAAAGTATCATGATGAATCAAAGAAGCTAACGGAAACGGATCTTCAGTAGCAACAT
TGTCTAAAAAAGGCTGCTGAGGTTGCGGGACGGGTGGAGGCTGCGGAAGAGGTTGTTGTTGTTGTTGAGCTGCAGTCGATGATTGGGACCGCAG
CCCCAGAAAATTCATTGCCTATCTATTAACCACTTACTTTTATCTAATCGGAGATGATGACGTCAGCACCTTGTTCTTGTTGTTCTTCTTGTTC
AATTTGTTGGTCTGTAATTAATTTGTTTCAGATCTGT

Primers for UN88587 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GAAGGAGCTGCTGTTGTTCC 59.99720CAATGAATTTTCTGGGGCTG 60.43920190 25542743
2TGATCCATCCTTCGTGTTGA 60.04820CAATGAATTTTCTGGGGCTG 60.43920252 24922743
3AGGAGCTGCTGTTGTTCCAT 59.87420CAATGAATTTTCTGGGGCTG 60.43920188 25562743