Simple sequence repeat (SSR)
| >UN88490 GGCTACAACTTCCATGAAATGGAAGTACTATCATTTTATGAAAGGTAAGACATACATCCTTATAAGCCATCGTTGACTCGTTTAATTTACTTGC AGTTATACCTCCGAAATTTAACAGTACATTGCAACACAAAAAGTACAGGCAAGTCAGGATGAAATGAACCGGCTCATTCACGTCTAGATTCCTA TTAATATACAAAACCACAAATCACTGGCGAGGCACAGCTGGTGGGGTCGGCTGATGGTTTTGCCCATAGAATCCAATACCCGGTGGCCTGTAGT ATCCGCTACTTGTAGTTTGTTGCTGTAGCTGTTGCTGCGGCTGAGGTGGCGGATGGGCGGGCCGCATCATACCCATTGCAACATGTGGCATTGA GGGTGGCGGCGGCGGTAGGCTGCTAGCACCGTATACAAAGGGCATACCATTACCACCCATCATCATGCCGCCAGAAGACTGAACGAACTGATTC GAGGGAGAATTTGTGCCAACTGTGGATGGTGGTAGAGGAGCTTGTGGTAGTGGTGGAAATGTGGTTTGGTTGGCTTGTGACATTGAAGTAAAAT AATCAGAATTGTTCATATCTGAATTTGACATTGGGTTTTCTAGCTTGGGTCTTTTCTCGGGGGGAAATATATTGGTGGCGAATACAGATGAGTT AAAGCCGTTGCTGATTGAGGCGGCTTCTTCTGCAACTAGAGAAGAAAGAACAGATGTAAGCATTTGTGCAGAGGATGTTGAAGCAGCAAGTTTT GCCGCCATTGCAGCGGCAGCAGCCTTTTTACTTTCTTCTTCACTAACATGTGTAGTACTTCCAACAGACATGGATTGAGGCAGACTCTCAACAG CTGGGGCTTCACCAGCGGGAAGGGAAGAAGGTGATGTCAGTCTCTTCCTCAATTTTACAGCATGGTCAATTTGATTTCGAGCAACCTGCAACTG ACTGTGAATAACATCTAGCCTCAATTCCTGATCCTGGAGTGCTTCTTTAAGCTGTGAAATCAAGGACGATCTAGTCTTTTCAGCAGTTTCAAGT TGGTTGACACATTCTTGAAGTACATTTTCTTGCTCCTGGATTTCATCTAGCAATGAAGATCCTTGTTGGACTCCTTGAGTTTCAATTTCTCTTT CCAAATCTCCAAACCGGTTAACTGCACCTTCACAGTTGTTTAATGCGGTATCTTCAGTAGTATTCTCATCATGTACCAAATGGAAAGCAGTGAT AATCTTTTCCGGGGCACCACCAACAGCCAATTTAAGTCTCAGTGAGTTAGAATCCCTCTTCACTATCTTGATAGGGTTAGGGTTCGGGGTAGAA GATGAAGTCTTTCCATTGGTAGCCGATTGAGGGAGGGGACTTTTACCAAGCATTTCCTCTCTCAAGTTCTGACCCCGCGATCCGAAAACCCTCC TGTCCTCCCATATGCCAACCAGTCTTGATGCTGCTTTCTTTCCATTATCATCACCATGTTCATTAACATGCTTGAGGGTTGAAGGAATGACCTT CCAAAATTCATTCACAAACTCATTGCCTTTTCGCCTACTATTTTGCAATATATCATTGGCCAAATACAGAAAAGAAACTTGCTGCGCCTGCTGG GCAGATTTAAATGATTTATGCCATATTTCAACAATCTGTTTGGCTTTCTTCCTGTGTGAAATACATGAACGAGACAATGACTCTATACTTTGTT GAGAACTGTTGAGTTTAAACAGCTTGTCGGACAACATTTTTCCATCAAAAACGTCATCACTCATCCTGCCAGCTATGTAAGTAGATTCAAGAAT CCCAGATGGATGGATGGAAAAAATATGAGGTTTGTGTAAGGTGAAGAAGAAGAAGAAGAAGATGATTTAGAGAGATGTGGACCATTCAAGTTTG TGTTCTTGTTTCATGTTTTGTTTCT |
Primers for UN88490 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GAATCCCAGATGGATGGATG | 60.096 | 20 | CACAAACTTGAATGGTCCACA | 59.45 | 21 | 100 | 1783 | 1882 |
| 2 | CAAGAATCCCAGATGGATGG | 60.272 | 20 | CACAAACTTGAATGGTCCACA | 59.45 | 21 | 103 | 1780 | 1882 |
| 3 | CGGACAACATTTTTCCATCA | 59.371 | 20 | CACAAACTTGAATGGTCCACA | 59.45 | 21 | 163 | 1720 | 1882 |