Simple sequence repeat (SSR)
| >UN88027 ATGGCATAAAATTCCTTTTTCGGTGAAAGTCTTTATTGACCCTGCTAAAAACCACCTCAAAGAATATCCGGTAAATGAGAAAAAAGATAGAAGA ATGGAAGTACAACATGGTATTGCATATGCTAGAAACTGAGAAATGATACCGCTGCAAACAAAGCTTCTTAGCTGCACCAACACTGTGTATCATT TGAATGGGATGGAAAAGTTGGATTACTTTACATTGTCAAGCTGTCGGGTTCTTGAACTATCTTTGCAAAGGTTTTAAGGAAGGCAGCCAAGTCC GCTCCATATACAATTCGGTGATCAGCGGTAACATTAACCGTCATTTGACTTTTCACGCTGAAATATCCATCTTTATCAGCAACAGCAGTAGGCT TGGAAGCTCCAACAGCCATAATAGCCCCCTGCCCAGGAGGAAGAATTGCATCAAACCGATCAACTCCAAACATGCCTAAGTTGGACAGAGTGAA AGTCCCCGAGTTGTACTCATGGGGCTGAAGTTGCTTGGATCGCGCTTTCTCCACAAGCTCCTTCCATTTCTCAGACAACAAATAAAGATCCAAC TTGTCAGCATCTTGGAGAACAGGGGTGATCAAACCGCCATTGATGGCTACGGCCACAGCAATATTAATACTACCATTATAGGTAAAACTCTTTC CATCTTTACAGCTAGCATTCACGACAGGGTGCTGCACAAGTGCCATAGCAGCAGCCTTTGCCAACAATGCAGTCATCGTAACACCCTTAGACTT AACCTTTGCGTATAGAGCATCAAGAGCATCAGTTATAATCGGATACCCAACACGAAACGTCGGCACAGACAAACTCTCAATCATATTCTTCGAC ACAGCAGCCTGCATTGTCGTAAACGGTACAACACTTGCACCAGCAGGCAAATCAGCAATCACAGGCGCCGATTTCACCGCAGCAGCAGCAGCAC TAGTCACCACAGGAGCACTCGCAACCGCAACGTCACTTTTCTTAGGCGCAATCCCCGCAGCCTTCTCCACATCCCCCGGAGTAATCCGCCCAAA CGGCCCTGTCCCAACCACCTTACTTATATCCACCTTATGCTGTTTCGCCAATTTCTTCGCATAAGGCGTCGAAACAATCTTCCCTGGAACCGGA GCTGAAACAGGGGCAGATACAGCCGCTGGTGCAGGCGCAGCCGCCACCGGAGGAGGAGCAGCAGCAGCAGAGCCGCCTAAAGTGGCTGCTTTGG CCTTGGCCTCATCCAATTCGGCTTCGGTTTCGGCTAAAAGGCCAATAGGAGCACCAACAGGGGCAGACTCACCAGCTTGGACAACAATAGCAGC CATAATCCCATCATAAAAAGTTTCGACTTCCATATCGGCTTTATCAGACTCAACAACAACAACAGACTGGCCTTTGGATAAAACATCACCTTCT GAAATGTTCCATGACACGATCTTACCTTCTGTCATGGTCGAACTTAAAGCGGGCATGAAGATCTCCCTTATTTTAGCGTGAACGGTTGCGTTTT TGGAACTCCGGCGCGTGAATGTGACGGCGGGTGATGCGAATCGGGGTTGGAATTTCTTGCCTGAGATTGATGATGATGAGAGGGAGGATAGTGG GACTTTAGATTGAAGGAGAGAAGAAGCCATTATGATTGTGTGTGTTTGTGAAGGTGTTTAAGTGTGTGTGAATTTGGGGGGTGATGGAATTGTA GTTAGGAAGAAATGAAGTGAGATATTATAAGTAAGAGGTGATGGGGAGGGGGAGTGAGGGCGGAGAAGACG |
Primers for UN88027 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ATTCTTCGACACAGCAGCCT | 60.02 | 20 | ATTGGCGAAACAGCATAAGG | 60.096 | 20 | 250 | 837 | 1086 |
| 2 | CGGCACAGACAAACTCTCAA | 60.025 | 20 | ATTGGCGAAACAGCATAAGG | 60.096 | 20 | 274 | 813 | 1086 |
| 3 | ATTCTTCGACACAGCAGCCT | 60.02 | 20 | ATTGTTTCGACGCCTTATGC | 60.103 | 20 | 276 | 837 | 1112 |