Simple sequence repeat (SSR)
>UN87991 CTGTGAATCGCATTCTTGGTGATGCAGATTTCCTTTTATATATATAATGAAACAATAATAAAAGTCTAGTAGTGAAAGTGGAATCAGTTGAGTT CTATGTTGGAAGCTGTAATTCATCGTTACACATAAAAAAGAACAACCGCCAGCACAAGTAGTTTTTATAGATACCTTCTGTTTTCTCTTTCTTT TCCACTTCTCACTATCTTCTTGTACAATCCAAATTCCCCCACAACACCATTCAAATCCAAACACGTGTCGTTTTCTTACCCACACTCAAACTAA CCAAATCAAATCTCCATATCGACATCTACGTCGGTTGTGCACTCATTTCTTACAAGGCAGCTGTATCTTGTTCGTATTAACGCGGTACTCTCTT ACGGCTCAGAATTTCCTGCTCTTTGAGTCGGTGCTGGAATCTGGCAAGGCGAGCTTGGAGGCTAACGAGACTTGCTGCTTTGCGTGAGAGCACA AAACTCAGTTGAGTCACGTAGTTGTCAATAAGGCTACCTGGTTTGTCAACTTCTGCCAGTAATTTCATTTCCTCACGCACTATCTCCATTGTAT CTTCAATCTCTTTCCTGTGCGCCGCAATTAGAGCCTCTTCTTCCTCAAGTATTTCATTGACATTCTCATCATGAAGCTGCTCAGGTTCCGACTG TTTTGATGCCATGTAACTAGCATTGGAAATACTTGCTCCTTGTTGCTTATTACCAACAGTTGGAAGATCGGTATTAGTACCATCTCTTTTTGAC CAACCGCTTCGCTCAGGTTTTTCATCACCATTATCCTTCTTCTGCCAGTTACTAACCTTTTCTGATCTTTCTTCTCTGTAAGTTTTTCTTCGAG GCGGTGATACCTTCTGCACTGTTTCTTCTGTATCGACAGAACTTGGCATCGCGTATGTTTTCTGATTGTTTGAAGCACTGAATGCACTTTTTGA ATCAACTTTCTCCTTATCTAGGCCAGAAGCCTGCCCACTGTCATCCCGATTGTTGAAGGCATAATTTGAAGAGCTTGGAGGAGGTTGTTTTTCA TAATCAGATGTGACATTGTACGAGATATTCTCTCTTTGTACACCTCTTTTACCTGTATCCATAACTTTTGGTTCTTGTTGTCGCTCGTAAATGT CATCTCCATCAGCAGAATATAGCATGCTTGCTGATGAAGAGTCTTTATTAGTTGTTTGTGAACTTCCGACTTGATCTTTTTTGGAGTTTCCACT TTTTGAAAGACTTTTAACTCTATCAGCATATCTCAAGGTATTGAGAGTGTGTTCGCAAGAACCAGCATTTGGCGATATGCAGGATATCATAACA GTCCTTGAGTTTCCGACAAATGAATCACGAAGAACTTCAGTTAGCTTGCTCCCTCGAAATGGGATATGAAGCTGGTCATTGTCAAGTGCACGAA TGCACTCCTTAAGAGCCAAAAGACTCTTATTAATTTCAGCACCTTCCATCCGTGTTTGTCGATCATTATCAGTTGTATCAGCACCTCTTTCACT GCCAGCAAGATCAATGAAGGAGATTTTCCCTACAACCTTCCCGCCCTTTGACTCATTGGCATCATTATTATTATTATTATAATTCCGTCTGGTA TCCTTTACCTCATTGTGCTTTTTCACAACTAGCTGTAATATTGCATGTGACCTTGAAGACTCCTCATTAGCCCCAGTAGAGCCAGTACTTCTAG AAGCACTTCCCTTTTCAATGTATTCTTTAACAATCTGTACATCTAGAACTTCAAATTCTTGCAATCCAACAATGCAAACTTGTTGTCGTCCATC TTCTCTCATGCAAAGTTTCTTTCTATCACTTAAAAGATCATAAAGCTTTCCACCATAGATCTCAAAGTAACTAAGCCATAACTTGAACTTTTGA TTACG |
Primers for UN87991 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TGCCAGCAAGATCAATGAAG | 59.948 | 20 | TGGCTCTACTGGGGCTAATG | 60.227 | 20 | 179 | 1504 | 1682 |
2 | CTGCCAGCAAGATCAATGAA | 59.948 | 20 | TGGCTCTACTGGGGCTAATG | 60.227 | 20 | 180 | 1503 | 1682 |
3 | ACCTTCCATCCGTGTTTGTC | 59.827 | 20 | TGGCTCTACTGGGGCTAATG | 60.227 | 20 | 232 | 1451 | 1682 |