Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN87987
TTTTTATTGATAAATACTTTCTAATTTTCCATCATTATAAAAAAATAAGTACATGAAGGTTTGTAAGTCGTTTTGGCAACCAGAGCCATGATAC
TTCATATTTAAAGGGTGGTGTGTATCAATGTCGATACGTATACATACAATACATTTCAGATATAAAGGTACATGGAGCTGCAAGTTGCAATGGA
TGACATCATGATTCGGTGCTCAGACTTGATTTATCTATACTGTTCGACTCTCATGCTAGGTACATGCCTAATCTACACCAATTGCAGGGCTTCC
TCACGTTTGATCTCAAATACCTTAAGAAGAGCATCTTCAACAACCTTGTCAGGGGTAGAAGCACCAGATGTAACACCAATTGTGATAGGCCCCT
TTGGTAGCCAGTTTTCTTGTTCAACCAATTCACCGTGCAGCAACTTGTAAGCTATTCGGTTTCCAGGGCCTATTCTTTGCTCACTGTCAATCCA
ATAAGATGGAATATTACGCTCCTCAGCAATCTCTTGTAAGTGTGAGGTGTTGCTTGAGTTCCACCCACCAATTACCAACATAAGATCAACTTTT
TCATCTACCAACTTATACATAGCATCTTGTCGCTCCTGAGTGGCGTCACAGATGGTGTTAAAACTTAGGAAATGATTGTTGACATTTTCTACTC
CATACTTTTGCATCATAGTTCTTTCTAATAATTTTCCTATCTCCTCTGTTTCTCCCTTCAACATTGTAGTTTGGTTTGCAATACCAGCTTTGAC
AAGATCCTTGTCGGGATCAAAACCCTCAGAAACTGCATATTTGAATTTCTCCATAAAAGCTTCTTTAGTCGAGCTAGATCCGTTGAGTTTACCA
CCAAGAATGTAATCACACACATATGTCGCCTCATCAATGTTCTTCACAACGATAAACTTTCCTGCGAAAGATGCTGTTGCTACAGTCTCCTCAT
GGTTATGTTTACCATGAATTACTGACGTATAGTCCCCCTTCTTATGCTTTTCGACAACATTCCACACCTTAGTCACCCATGGGCATGTTGTATC
GACTATTTGTACTTCTTTGTTACTCAAAGTCCGCATCTCTTCTACTGCAGCTCCAAAGGCCGGCAGAATTACAACATCGCCCTTGTCAACAACA
TCAAACTGTTTCTCTCCGCCGTCAATGGGGATATCCGTAACTTCCATCTCTTCTAGCCTCTTATTAACAGTAGGGTTGTGAATAATTTGATTTG
TGATCCATATTTTCTCATCGGGGAACTGTTTCCTGGCTTCATAAGCAATCTGGACGGCACGTTCAACACCCCAACAAAAACCAAAAGCTTCTGC
AAGCTTTACAGTGACATTTCCCCATGTATATTCGTAGTTATTCTCCTTCAAAGTCTTTATGATGTCGCTAAAATACTCCTGACTCATAAGTTCA
AGAGTCTCCTTCTTATGACCAAATCCTTTCCGATTATAATTCTCGCTTCTTGTCAAATTATGCCTGAACACCTTCGCATCAAACTCCTTTGTTG
ATTCTCCGCCCGAGCATCGGACTGTTAACGGCGACTTCCGGCACCGGAAGACTTTGATGTCTGGTAAGGAGAGGTAGTCTGTGCGAGTTGACAG
AGGTGTTAGCTGCAAAGACGCCATTGATTAGTGTTTTTCTTTTTTTGTGTGTGTGTGAAATGAGTGTGTGTTTTAGTGTGTGTGAAATTATTAG
GGTTTTTGATGTGGTTGGTGAAAGTGTGTGTGTGATTCTTTGCTGATTTGAAGGGGAGAGATTTTTTTATTTTTGTA

Primers for UN87987 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1ACACCTTCGCATCAAACTCC 60.11920CTCCCCTTCAAATCAGCAAA 60.18420273 14781750
2ACACCTTCGCATCAAACTCC 60.11920CCCCTTCAAATCAGCAAAGA 60.18420271 14781748
3ACACCTTCGCATCAAACTCC 60.11920TCCCCTTCAAATCAGCAAAG 60.18420272 14781749