Simple sequence repeat (SSR)
>UN87987 TTTTTATTGATAAATACTTTCTAATTTTCCATCATTATAAAAAAATAAGTACATGAAGGTTTGTAAGTCGTTTTGGCAACCAGAGCCATGATAC TTCATATTTAAAGGGTGGTGTGTATCAATGTCGATACGTATACATACAATACATTTCAGATATAAAGGTACATGGAGCTGCAAGTTGCAATGGA TGACATCATGATTCGGTGCTCAGACTTGATTTATCTATACTGTTCGACTCTCATGCTAGGTACATGCCTAATCTACACCAATTGCAGGGCTTCC TCACGTTTGATCTCAAATACCTTAAGAAGAGCATCTTCAACAACCTTGTCAGGGGTAGAAGCACCAGATGTAACACCAATTGTGATAGGCCCCT TTGGTAGCCAGTTTTCTTGTTCAACCAATTCACCGTGCAGCAACTTGTAAGCTATTCGGTTTCCAGGGCCTATTCTTTGCTCACTGTCAATCCA ATAAGATGGAATATTACGCTCCTCAGCAATCTCTTGTAAGTGTGAGGTGTTGCTTGAGTTCCACCCACCAATTACCAACATAAGATCAACTTTT TCATCTACCAACTTATACATAGCATCTTGTCGCTCCTGAGTGGCGTCACAGATGGTGTTAAAACTTAGGAAATGATTGTTGACATTTTCTACTC CATACTTTTGCATCATAGTTCTTTCTAATAATTTTCCTATCTCCTCTGTTTCTCCCTTCAACATTGTAGTTTGGTTTGCAATACCAGCTTTGAC AAGATCCTTGTCGGGATCAAAACCCTCAGAAACTGCATATTTGAATTTCTCCATAAAAGCTTCTTTAGTCGAGCTAGATCCGTTGAGTTTACCA CCAAGAATGTAATCACACACATATGTCGCCTCATCAATGTTCTTCACAACGATAAACTTTCCTGCGAAAGATGCTGTTGCTACAGTCTCCTCAT GGTTATGTTTACCATGAATTACTGACGTATAGTCCCCCTTCTTATGCTTTTCGACAACATTCCACACCTTAGTCACCCATGGGCATGTTGTATC GACTATTTGTACTTCTTTGTTACTCAAAGTCCGCATCTCTTCTACTGCAGCTCCAAAGGCCGGCAGAATTACAACATCGCCCTTGTCAACAACA TCAAACTGTTTCTCTCCGCCGTCAATGGGGATATCCGTAACTTCCATCTCTTCTAGCCTCTTATTAACAGTAGGGTTGTGAATAATTTGATTTG TGATCCATATTTTCTCATCGGGGAACTGTTTCCTGGCTTCATAAGCAATCTGGACGGCACGTTCAACACCCCAACAAAAACCAAAAGCTTCTGC AAGCTTTACAGTGACATTTCCCCATGTATATTCGTAGTTATTCTCCTTCAAAGTCTTTATGATGTCGCTAAAATACTCCTGACTCATAAGTTCA AGAGTCTCCTTCTTATGACCAAATCCTTTCCGATTATAATTCTCGCTTCTTGTCAAATTATGCCTGAACACCTTCGCATCAAACTCCTTTGTTG ATTCTCCGCCCGAGCATCGGACTGTTAACGGCGACTTCCGGCACCGGAAGACTTTGATGTCTGGTAAGGAGAGGTAGTCTGTGCGAGTTGACAG AGGTGTTAGCTGCAAAGACGCCATTGATTAGTGTTTTTCTTTTTTTGTGTGTGTGTGAAATGAGTGTGTGTTTTAGTGTGTGTGAAATTATTAG GGTTTTTGATGTGGTTGGTGAAAGTGTGTGTGTGATTCTTTGCTGATTTGAAGGGGAGAGATTTTTTTATTTTTGTA |
Primers for UN87987 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ACACCTTCGCATCAAACTCC | 60.119 | 20 | CTCCCCTTCAAATCAGCAAA | 60.184 | 20 | 273 | 1478 | 1750 |
2 | ACACCTTCGCATCAAACTCC | 60.119 | 20 | CCCCTTCAAATCAGCAAAGA | 60.184 | 20 | 271 | 1478 | 1748 |
3 | ACACCTTCGCATCAAACTCC | 60.119 | 20 | TCCCCTTCAAATCAGCAAAG | 60.184 | 20 | 272 | 1478 | 1749 |