Simple sequence repeat (SSR)
>UN87985 TTTTTATTGATAAATACTTTCTAATTTTCCATCATTATAAAAAAATAAGTACATGAAGGTTTGTAAGTCGTTTTGGCAACCAGAGCCATGATAC TTCATATTTAAAGGGTGGTGTGTATCAATGTCGATACTGAACCCATGGTTTTGTAGTATACATACAATACATTTTTCATATATAAAGGTACATG GAGCTGCAAGTTGCAATGGATGACATCATGTTTCGGTGCTCAAACTTGATTTATCTATACTGTTCGACTCTCATGCTAGGTACATGCCTAATCT ACACCAATTGCAGGGCTTCCTCACGTTTGATCTCAAATACCTTAAGAAGAGCATCTTCAACAACCTTGTCAGGGGTAGAAGCACCAGATGTAAC ACCAATTGTGATAGGCCCCTTTGGTAGCCAGTTTTCTTGTTCAACCAATTCACCGTGCAGCAACTTGTAAGCTATTCGGTTTCCAGGGCCTATT CTTTGCTCACTGTCAATCCAATAAGATGGAATATTACGCTCCTCAGCAATCTCTTGTAAGTGTGAGGTGTTGCTTGAGTTCCACCCACCAATTA CCAACATAAGATCAACTTTTTCATCTACCAACTTATACATAGCATCTTGTCGCTCCTGAGTGGCGTCACAGATGGTGTTAAAACTTAGGAAATG ATTGTTGACATTTTCTACTCCATACTTTTGCATCATAGTTCTTTCTAATAATTTTCCTATCTCCTCTGTTTCTCCCTTCAACATTGTAGTTTGG TTTGCAATACCAGCTTTGACAAGATCCTTGTCGGGATCAAAACCCTCAGAAACTGCATATTTGAATTTCTCCATGAAAGCTTCTTTGGTTGAGC TAGATCCATTGAGTTTACCACCAAGAATGTAATCACACACATATGTCGCCTCATCAATGTTCTTCACAACGATAAACTTTCCTGCGAAAGATGC TGTTGCTACAGTCTCCTCATGGTTATGTTTACCATGAATTACTGACGTATAGTCCCCCTTCTTATGCTTTTCGACAACATTCCACACCTTAGTC ACCCATGGGCATGTTGTATCGACTATTTGTACTTCTTTGTTACTCAAAGTCCGCATCTCTTCTACTGCAGCTCCAAAGGCCGGCAGAATTACAA CATCGCCCTTGTCAACAACATCAAACTGTTTCTCTCCGCCGTCAATGGGGATATCCGTAACTTCCATCTCTTCTAGCCTCTTATTAACAGTAGG GTTGTGAATAATTTGATTTGTGATCCATATTTTCTCATCGGGGAACTGTTTCCTGGCTTCATAAGCAATCTGGACGGCACGTTCAACACCCCAA CAAAAACCAAAAGCTTCTGCAAGCTTTACAGTGACATTTCCCCATGTATATTCGTAGTTATTCTCCTTCAAAGTCTTTATGATGTCGCTAAAAT ACTCCTGACTCATAAGTTCAAGAGTCTCCTTCTTATGACCAAATCCTTTCCGATTATAATTCTCGCTTCTTGTCAAATTATGCCTGAACACCTT CGCATCAAACTCCTTTGTTGATTCTCCGCCCGAGCATCGGACTGTTAACGGCGACTTCCGGCACCGGAAGACTTTGATGTCTGGTAAGGAGAGG TAGTCTGTGCGAGTTGACAGAGGTGTTAGCTGCAAAGACGCCATTGATTAGTGTTTTTCTTTTTTTGTGTGTGTGTGAAATGAGTGTGTGTTTT AGTGTGTGTGAAATTATTAGGGTTTTTGATGTGGTTGGTGAAAGTGTGTGTGTGATTCTTTGCTGATTTGAAGGGGAGAGATTTTTTTATTTTT GTA |
Primers for UN87985 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ACACCTTCGCATCAAACTCC | 60.119 | 20 | CTCCCCTTCAAATCAGCAAA | 60.184 | 20 | 273 | 1498 | 1770 |
2 | ACACCTTCGCATCAAACTCC | 60.119 | 20 | CCCCTTCAAATCAGCAAAGA | 60.184 | 20 | 271 | 1498 | 1768 |
3 | ACACCTTCGCATCAAACTCC | 60.119 | 20 | TCCCCTTCAAATCAGCAAAG | 60.184 | 20 | 272 | 1498 | 1769 |