Simple sequence repeat (SSR)
| >UN87715 TCAGCGCTTTCTTCTTCAAGTCCCATTTCTTCTTTGCAGTCTCAATTGCTTCTTCCTTATTCTTCTGGAGAACACTGAACCATTGAAGGTACTG CGCGTCAATTGCATCAAGCTCTTGCTTCAAATCTTCACACCTATCTCTGTCATCATCTTGAAATAGTGAAGAACAATTAGAAGAGCTCTTCATC CAATCACCCGAAGCCGAATATGTAAACGATGAATTTCCTGACCCTTGAAAACCATTATTTTGTGGCTCAGAAACCTTTGTTGGCGGCTCTAATT CGAGTTGACCCATTTGAAGGATTACTGAACTTTTAGGTGAGCTCATTTTGGAAGAGGGTTTCCATGTTGGCACAAACTTAGATATCAGATCATC AATCAGCTCCGTTACGACAGCAATGTCTTCGTGCACAAGGTCTAGCTCTTCAACCATTTCTTGAGCTATGGCATACGCAGTATCCTCTTCCAGG TAAAATGAGAATTCAACATGCTGTGGTTTACCAGTAAAAACATCTAATCTCAAGTTGATTGTGACAGAGTTCTCTTCAGTCATCTCGCCTTTCA ATTGGATATCGTTTCTCTCATTGACATTCTGAACTTTAGCTGACGGAAAATGGGGGCTGCTAGTGTTGCTCTCCACTGATGAGCTAACAGAGGA CATCTTGTTGTCATTACAGTCTACGTCCATGGGACATGAGTTTGGCAATGACAGGTTCACCAAGTTAAGGTTAATAGGCTCATGTACACGCTCC TTTATACTATCTATAGCAAGAAATGGATCGTTTAGGAGCTCTTTTGCAGGCAATCTTTGAGACACAGGCACCAAGCACTTCTCTATAAACTCCT TGACTTGTGGGTCTTTGACTTTTGAGAGACCAGCGGGCTTTATACCAGAAGTAACCTTCCTGTATATTTGTGCTTGATTTCTGCATTCGCTGTA TGGATATTCACAAGTAATCAATTCTAGTATGCACATTCCGAATGAATATATGTCCACAAGTTGATTATATTCCTCTTCGTATAGTTCTGGGGCC ATGAATTCAGGAGTTCCGATCAAACTTTTGACGGCAGGGGGTAACATCAGTGTTGCTAATCCTAGATCACCAATTTTCACTTCTCCATGATTTC CATTGACAAATATGTTGTCACATTTCAAGTCTCTATGAATAATAGGTGGCTCTTGACTGTGGAGATAAGTCAAGCCTCGGAGGATCTGTCTCGC CCAATTCTTGATAGCCTTCAAATCTACACTCTTATGCTTCTTGCGGTATTGCCTCAAACTCCCAGACGTGAACAGTTCAGTAATCATGTTAACG GTTTTGTTCTTATCGTCCACCCAAGAAACATACGACTTGATTATGTTCTCATGTTTCAAAGTCTTCAGAAAGTGAACCTCTGAATAAACTCTTT CTAGATGTTCTGAAGATTGCATAGCATCATCCAACATCACTTGGTTCCAAGCAATTTCGATTCCTTCAACTTCATCAAACCCCTTGTAGACAGT CTTAGAGGCTCCTCTGCCCAGTAATTCATTATACCTAACGTAACGATTATTCGGACACCTTTCGACAACATCAGGATCATCGAAAAACATCTCT TGCTGCTGCTGCTGCTGCAACTTGATTTTCTCAACCCCCAAATCCATCCCTAAAA |
Primers for UN87715 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TTCCAAGCAATTTCGATTCC | 60.016 | 20 | TTTGGGGGTTGAGAAAATCA | 60.28 | 20 | 186 | 1455 | 1640 |
| 2 | AGGCTCCTCTGCCCAGTAAT | 60.233 | 20 | TTTGGGGGTTGAGAAAATCA | 60.28 | 20 | 131 | 1510 | 1640 |
| 3 | TGGTTCCAAGCAATTTCGAT | 60.448 | 20 | TTTGGGGGTTGAGAAAATCA | 60.28 | 20 | 189 | 1452 | 1640 |