Simple sequence repeat (SSR)
>UN87700 CGAACGGTATGCATGGCAGGCGCGTTGACTCCATCTGCCATATATGTATTGGACCAAGAAAGCCAGTCAGCTCGTCTGGTGGTCGTTTATATAT AGACTTGAGCCAAACCATGATGCCTTTCCCTTGCAGTTTCTTCTGGACGTTGAGATCACTTATGCTAAAACCCCAACTTGATACCTGCAGGACA GATTCCTCTATAAACGGTTTTACATTCCCTTGACGAACCGACTCTCCCAAATCCCTCTTCCAGAACTCTTGATACCTCAATTCTTCTATAAAAA TTTTGTCCCTTTTTCCAAGTGACATTCCCAGCCACTTATCTATTTGATCAAGGTTTCCTGACAAGAAGCTGCGGCGGTAGAAGTAAGAAAGAAG TGCCGGAAACTTCCGTGCTAAAAGGTACATTAATCTTCTTTTTGACGTCCATTTATCCCAGGTCCTGCGTATCTCAGCCTTATTCATGCTTGGT TCATATGGATTGAGCAAAGGTGCTACCATAAAAGCACCTGCAATTCTATCGGGAATGTACTTGAGTGCAGCCCATGTATGCATACTTCCACCCG AGTATCCAACCACCCAAAACTTATCAGTTATATGCACAGCATATGATAAGAACAACAGGTCCATTGCTGATGACTCAAGGTTCCTGCCAGGATG GGGATCACTTTCCCCAAACCCAGGAAGATCATATGATACCAAGCGAACACCAAATTCTTGGAGTAATGAATCCTTAATCCCAGGTATTCCTGCT AGTCGCGATGATAGGAAAGAATGTGATGTGACCAACGTATATCGAGCTCTATCAGGTGGGACGCCTTGCTCCTGATATGCCAAGTGTCTGCCAT CCGGTAAAAGTATACGAGTAGCGTTTGGAGGATATATTTGCAATCTTTCTATCATGGGAGCAGTTGTATCACTTTCCGAGGTTACTAGTAGAAC TGCAAGCACAACAGCGAAGACAACGGAAATAACACTCCACGAGTGCATCGGATCACGATCTTCAGGCAAATACCGATTCAAAAACTTAAACCTA ACACACACTGATTTACACACACCTCCAAAACTCCTAACAATAAATGAATCATCTCTTAATATACTCTGTTTCACCACGTCTCTACATCCTTTAC CGAACTCAACGCTCAGCTCCGCTACTCCTTTAAAAAACTCAGTCGCTTGATACCGGAAGTCGTCTCGAGGTTTTCCGATCACGTACGGCGGAAC TCCGGCGGCTGTGTACGGAATTCCGGTTGTTGCGTAGGGAGGGACGCCGGTGGCTGTGTAGGGGATTCCGGTGGCGGTGTAGGGAGGGACGGCG GTGGTGTATGGTGGTGGACGGTTGACGTCATCCATTGATCAATGGTGAATTGTGGAGAGAGAGAGGGTTTGTGTGTGTGTGTTTTAGTAGGTGT GAATTTGCATGAGGTGGAGAGAGAGGTAGTGAGAGTGACAGGGGGGAGTT |
Primers for UN87700 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCTCGAGGTTTTCCGATCAC | 60.195 | 20 | CCTCTCTCTCCACCTCATGC | 59.945 | 20 | 246 | 1191 | 1436 |
2 | GTCTCGAGGTTTTCCGATCA | 60.195 | 20 | CCTCTCTCTCCACCTCATGC | 59.945 | 20 | 247 | 1190 | 1436 |
3 | GCTTGATACCGGAAGTCGTC | 59.7 | 20 | CCTCTCTCTCCACCTCATGC | 59.945 | 20 | 264 | 1173 | 1436 |