Simple sequence repeat (SSR)
>UN87225 AAATGATATAACTAGTGCTTGGTGAATCTCTGAAGAACTTCAAAGTAATCAGGGAACGTCTTACGAGTGCAAGAAGGATCCTTGATGGTCACAG GGACATCTGCACAGGCAGCAAGCGAGAAAGCCATGGCCATCCTATGATCATCATAAGTGTCTATCTCAGTCACATTCAACTTCTCAGGTGGAGT GATCACGCAGTAGTCAGGCCCCTCTTCAACTGTCGCTCCCAACTTTCTAAGTTCTGTGCAAATGGCAATCATTCTTTCGGTTTCTTTAACTCTC CAGCTAGCAACATCTCTAATGGCTGTAGGACCATCGGCATAAAGAGCGACGACAGCAAGAGTCATGGCAACATCAGGCATTTTGTTCATGTTCA CATCCACAGCACGCAAATGTTTCCTTCCGGAAGCATCTCTAGGTGGGCCCTTCACTGTGACCGAGTTCTCAGTCCATGTTACTTCGGCACCCAT TTGTCCAAGAACCTCGGCAAATTTCACATCGCCCTGCAAACTACTTGTTCCGCAGCCTTCAACAGTGACGGTGCCTCCAGTTATGGCTGCACCA GCTAAGAAGTAACTCGCACTTGAAGCATCACCTTCAACATATGCATTTCCGGGTGACTTGTACTTCTGACCACCTCGGATTAAGAACCTGTCCC AACTATCACTGTGTTCTACCGAGACACCAAACCGTTCCATCAATTTCAGTGTCATCTCGACATAGGGTATCGAAATTAGTTTATCAATTATTTC AATCTCTACGTCTCCAAGGGCAAGGGGAGAAGCCATAAGCAAAGCAGTCAGGTATTGACTACTGATAGATCCTGACAACTTAACCTTTCCGCCT GGGAGGCCACCAGCTCCAACAACACGTACAGGTGGGCAGTCTGTCCCAAGAAAACAATCGACATCAGCACCAAGCTGCTTAAGACCCGTGACCA AGTCACCTATCGGTCTCTCTCTCATCCGGGGAACCCCATCTAGTATGTAGCTCGAATTTCCACCAGCAGCAGTAACGGCTGCAGTCAATGGGCG CATTGCAGTTCCGGCATTTCCAAGAAAAAGCTGAATTTCATCTTTAGCTTCCCTACCCACCGGAAACACACCACCGCAACCTTCCACAACTGCC CTTTTAATTGCACCATCTTCCTCAACACGTAGCCCTAAAGCTCTTAAAGCTCCGAGCATGTAATGAACATCATCACTGTTTAGTAAGTTGTCAA CAACTGTAGTTCCCTCAGATAAAGCAGCAAGAAGCAAAATCCTATTAGACAAAGACTTTGACCCAGGCAAATTAACAGTCCCAGAAATCTCTTT AATCGGTTGCAGCACAATTTCCGGCACAGTTGAGGGTTTTTCAGTTGTGACAGTTGACTTGCAAAAAGTCAATCTTTTTTTCACATTTGAAGAA GAAAGATTGAATTGGGTTTTGTTTTTGGGTTGAAAAGATAAGAAATTTTGTGATTTGGGGTGTTTGGATGTGAGTTTAGTGGTGTGTTGGAGAT TGTGTGTTAGGTGGTTGTTAATGTGTGTTGATCTTGTTGTTGCCATTGTTGTGTGTGTGTGAAATTGTACCAAGAACAGAGAGTGGGTTTGGTG TTGTATGATGGATTTGTAAGTAGGTTTGGTGTGAAGGAGAGTAGGTAGGTG |
Primers for UN87225 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GGCACAGTTGAGGGTTTTTC | 59.574 | 20 | CCATCATACAACACCAAACCC | 59.963 | 21 | 271 | 1339 | 1609 |
2 | GGGTTTTGTTTTTGGGTTGA | 59.679 | 20 | CACCAAACCCACTCTCTGTTC | 59.607 | 21 | 175 | 1424 | 1598 |
3 | GGGGTGTTTGGATGTGAGTT | 59.679 | 20 | CACCAAACCCACTCTCTGTTC | 59.607 | 21 | 132 | 1467 | 1598 |