Simple sequence repeat (SSR)
>UN05087 ATCCTTTTGCAGATTTATGTTTTTCAGCTGACTAGGAACCCAACCATCAAATTTGTTATTGGCAACATTCAGGTTCTTAAGGGGAAGATCAGCA AGGACATTAATAGTTCCTGTAAATTGGTTGTTCTGCAAATACATATCCGTGACACTGGACAGCGAGCTTAAGCTCTGAGGAAGATCACCGGTTA AAGAATTGAAAGATACATCCAATGTGGATAGAGCTGTAAGCTTTCCAAACACGTCAGACAGCTGGCCGTTTATTTGATTGCGAGCAACATTTAA ATATTTAAGAGAAGTCATTAGTGATATGGAATACGGAAGGGTGCCACTGAAACCACATCCGGCAAAATTTAGTCGCTCCAAGTTTGGAGGAAGG TTATAAGGAATCTGGTTGCCAAGATTATTGTTGCTTATATCGAAATTTTTTAAGGATGTCAAACTAGTGAGCTGGTATCCTAAATTGCCGCCGG AAAGTCCAAGATTGGATATGTCGATTTCGGTGACTTTAGAACCTGAGCACTTAACGCCTTTCCAGTTTTCGCCACAAGGGTCGCCACCATTTGC GGTCCATTTGTTTAACTGTCCCGGGGAATTAAGACCTTGAAACATGACCCTCAGAGCAGCAGCATCAGATGGATCTGTGTCAGCATTGATGGAG GTTGGACCCAACAACAATACTACTAGAACAACAACAACAACCAATGTTGTTGTTGTTGGTGGTGGTGTCATCATCTCAACAATTTTAAGGAACA AAAACTTTTTCTTCAAGAACC |
Primers for UN05087 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GTTTAACTGTCCCGGGGAAT | 60.053 | 20 | AGATGATGACACCACCACCA | 59.801 | 20 | 161 | 574 | 734 |
2 | GTTTAACTGTCCCGGGGAAT | 60.053 | 20 | GATGATGACACCACCACCAA | 60.23 | 20 | 160 | 574 | 733 |
3 | GTTTAACTGTCCCGGGGAAT | 60.053 | 20 | CCACCACCAACAACAACAAC | 59.745 | 20 | 150 | 574 | 723 |