Simple sequence repeat (SSR)
>UN87104 GTCAAGACTTGCTGTCATTTCTTCAATATAAAACTAGAACAATATAAAAGTCAGATTATTCGACACTTGCATCAACATCGAAAACTATAAATTA CTTGAGGACGAAAGAGGAACATCAACGAAGGGGTAAAAACGGAAGTAAAAAAGCGGCACATAAAATTTAGAAAAGTCAAAACTAACGAAAAATT AGCACGCACGCATGTTCCTACATCAAACTAACTGAACCAAAACCATAAGACACTGGTAGTAGAATACAACCTCTCTGAAGGTACAGGGCAGCGG CAGCCAAAACCAAGTACTCTTTATCATCGATTATTTCAAGCTTGAATTTAAGCCCACTTTCAAACTCATTACAAGACCCTGAAAAACCCGAGTC AGGTATGAACCGCCTGATTAGTAGCTGCTTTACCATAGCTGTTGTGACTGCTGTTGTGGTTTTGGCTGGCCTTGGGACCCACCAACAAGCGACC CATCCCTAGGGTTCTGCTGCAGTTGATGATCCTGTGAGATCCCCGTCTGGGATTGGTAGTAATTTGGATAGTTGAAAGCGGCTCCACCGTAGCT CTGTGAAGGCTGCTGCTGTTGCTGCTGACCTTGCCTGTACCCACTTGGCTGCTGCTGATTTTGACCCTGAAAACTGTAATATGTGTTGGCTGGT ACAGCTCTGGAACCAGCTCCTTGAACCCACATTGCTGAGTTATCGTTCTGCTGCTGCTGCTGAAGAGAGAGCAACTGACTCTCTTTGTAATGGT TGGCCAATACATCATCATAACTTAATGTAGATCCAGCAGGACCTGCAGGTTGATTAACTTGATAGTTCCCGGGAATTGCAGTAGAATTGCCATA AGATCCATAGCCTGAAGGAACAGCTGCAGACTGAGGCAAACTGCTGACAGAGACGCTATTTTTGTATTGAGGGAGAACGGCACCCAACTGTTGA TGATAAGTGCTATTTCCAGCAAATGCTTGCTGAAAACCAGACGGCATGTATGTGTAACTTTGAGGTAGGAAAGGGTAGCCAATCATGTTTGCAA AAGGTCCCAAAGGAAGAGTAGGTTGAGAGTAGGGGTGCACAAGGTGTTGCGGAAGAGCAGGTCCCGTAGGAAGACTGTTTCCAGGCAGAGTCTG TTGTGTCGGTTGAGATGATGAATAAGCCCCGGTCTTCAAAGCCTCCATTGAGATAGTTGAACCACTGATAGAAGATACTGAGCTACCATATTTT GTAGCCATTGACTGACTAGTAGGAAACTGCGAGTATGAAAGATCAGATTCTCTGACAGGATGACCATTTGCTGTTAACAACGTGTTTGGTAATG AGTTTGTATATGCAGCCTGCATAACATTGGAGAATGGTGCTGCATTTGGCATCTGTGTAGTTGTCTGCGATTGAGGGAAAGCAGGATTCAATAA CTGGGTCCCATCAAATGTATAACCAGGTGCAGCTGCAGATGAAGAATAACCGTACTGATTGCCATGTGTCACCTCAGGATTTTCTTGCTTCAAC ACCTCCGTTTGTGAAGCAGAAGATAAATCATAACTCCCAGAACTAGGCCCTGTCCGGTTTACTAAGTTGTTATCTGATGTAATTATCGACTCAT CACCATAGTACTCGGGATTTCTAGTTTCAGAAGGTCGCGCAGATGGAATATCTGCTTCAGCAGGTTCATCTTCTACTTTGCTTAACTGTCTAGA TCCAAAAGATCCTGAAAACCCAGGATTCGTATTAGCACTAAAGCTCCCAAAACTCAAGTGTGAACATTCAGCGCTCTGGACTTGCAGATGATTT GGAATAACGACCGAAGGAACGTCCTGTTCAGGTTCATCGACGTGTCTCTCTTCCTGGATATTAAGTTGCTGCATGTTTGCACTTATTGAGGATG CTGAAGCATCACCTTCTTCAGCTTCATTTTGCTCATAAGCATAATCCTCAGGATGGAAAGAATCTATGTTTTTATTCACGTCAGTATCATATAA AGCTGCACCACCAGAAGTGTCATCCTGATACTGTCTACTCGTAACAGAAGCAGGCACGGTATGATCTTCATAAACACCTTCATCTTCTGCCTGA GGCTCATCTATCTGAGAATCAATGTATTGATTACTTTCATACGGTAAATTGGACTGACTCACGTTCTCAGACTCTACAGGAGGTTCTGATACAG ATTGCACGTCAACAACTTGTGGTTGTTCCATAACAGGCCAATCGTCATCAGTAGAAACATTATGTTGTTGGTAAACTTCTGAAGGATTTGAATC CCATTCATCATAATGTGTTGAAGAAGGCTGAGGTGGGGCCGGAGCGGTGTAAGGCTTGTTTTGTGGTTTGCCCATTTTCACAATGTCAGCCATT GACTTTTGACCAGGAGCGCCCAGCCATGCAGATTGGTATCCAGAAGATGGTTGTTGTGGAACTGTTGCAGGAACATCAGCTGCACTGTACGTTG ATGCTTTATTTTCATAGCCAACAGAATCACTGTAAGATGGAGGATTATCCCAATTCGTGTTAGTTGCCGCAGCTCCATAAGATGGTGCAGATGA TTGTGTGTAAGAGCTTGTTCCATAGGAGCTTGTTCCATAAGAACTTGTTCCATTCTCCCTCTTAGGTTTTCCATTATAACCACCAGACTCAGAA GAGTTATACTGTGATGAACCACCACGTCCAGAATAACGATCTGTACCACTTCTGCCACCACGGCTTGAAGTGCTACCACCACCACGAGGCCTGA ATTCTGTTGTATCCTTGGACTCCTTTTTCTTTTCTCGTTTGCTCTTCACCTCATGGAAAGGATCTTGAGATAAGAGACGATTAACAGCTTCATT AGGGTCCATATTACACTCCTTTAAAGCAGCATAGATCTCAACATCAGATACACCGTTTACTATCTCTTTTAAACTCTGTACCATCTTTCTTGAC CCTGCCGGAATCCCTGCTACGCCGCCGCCGCCTCTGCTTTCCATCAGATCTTTCTAACAAAGCCGCCGCCAATTCAAGATTTTTATTATTCAAG AAAAAAAAACACACACACAGAGTTGATGAGAAGGGAGCAGCGAGTGGAGAAAGAAGGAAGGAGGAGA |
Primers for UN87104 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CTCCTTGAACCCACATTGCT | 60.111 | 20 | GCCGTTCTCCCTCAATACAA | 60.074 | 20 | 253 | 675 | 927 |
2 | CAGCTCCTTGAACCCACATT | 60.111 | 20 | GCCGTTCTCCCTCAATACAA | 60.074 | 20 | 256 | 672 | 927 |
3 | AGCTCCTTGAACCCACATTG | 60.111 | 20 | GCCGTTCTCCCTCAATACAA | 60.074 | 20 | 255 | 673 | 927 |