Simple sequence repeat (SSR)
>UN87096 GTTAGACGCTTCACCAACATCAAAAGCTACGAGCAAGGAAAAAAAACACCAACGAAGTAAACAAAGTCCACTAACCACAATAACCAAATGTGTT CCTACGTTACACTAGCTCAACTCACACCATCAAATACGTTACTAAGATACAACCTCTCAAGGCACAGAAAAGACCCTGAAAAACCTTGATTGGA TATCATCCATCAGTATCCAGCGTTTTGCCATAGCTGTTGTTGTGATTGGAGTTTCGGTTGGCCCTGGGACCCACCAACGTGTGAACCATCCCTA GGGTTCTGTTGTAGCTGATGCTCCTGTGATATCCCAGTTTGGGATTGGAAAAAGTCTGGGTAGTTATGCGCTGCTCCACCATAACTTTGTGAAG GCTGCTGGCCTTGCCTGAACCCACTTGGCTGCTGCTGGTTCTGACTCTGTAAGTTGTAATATGCACTGGCTGGAACTGCCGGCATAGTTCGAGA ACCACCTCCATGAACCCACATTTGAGAGTTCTCATTCTGCTGCTGCTGCTGTTGGAGAGAGAGCAAATGACTGGTGTCTTTAAAATGGGCATTC AATACATCATCATAGGATCCTGCAGGGCCTGCAGGTTGGCTAACTTGGTAACTCCCAGGAACCGCTGTTGAACCACCATATGAACCGTAACCGG AAGCAGCAGCTGGAGACTGAGTCAAGCCGCTCAAAGAAACACTGTTTTTGTACTGAGGTAGCATGGCTGCTAACTGCTGATGATACGTACTGTT GCCAGCAAATCCGGGCTGGAAACCGGATGGCATATACGTATAACTCTGAGGTAAGAAAGGGTAGCTCATCATGTTGGCATACGGGCCCAAAGGA TGTTGGGAGTAAGGGTGCATAGCAAGGTGTTGTTGAATTGAAGGTCCAGTAGGAAGCGTTTGTTGTCCTGGTTGAGATGATGAAAGCCCCACAC TCTTCAAAGCCTCAGCAATAGATATGGTTGGATCATTGATCGAAGACACCGAGTTGGCATACCTAGTAGGCATGGACTGACTAACTGAAAACTG TGAGTATGACAAATCAGATTCTCTGGCAGGATGACCATTTGCTGCCAACAATGAGTTTGTGTCTGCAGCCTGCATGGCATTTAAAAAGGGTGTC GAAATTTGAGTCTGTGGAGGTGTCTGAGATTGAGGGAAAGAAGAGTTCAATAGCTGGGGATTATCATATGTATGAGCATGTGTTGCAGGAGGAA ACCCATATTGACTGCTATGTGACACTTCAGGAACATCTTGATTCAATACCGCGCCTTGTGAAACAGAAGGTAAATCATAACTCTCAGCTCCTGT TCTTTGAACCAGATCGCTCTCTAATGTTCTTGTAGGCCCGTCATCATAGTACTCGCGATTTGTAGTTTCAGGTTGCTCAACAGATGAAGTTCCA GATAAACCAGCATTCAGGTTTGCCCCAAAGGTTCCAAAACTCAAGTGTGCCAAATCGGCAGTATGGACTTGCAGGTGATCTGGAATTACTACAG AGGGGATGACATCATCTTCAGGTTGGTCCATGTGCTCCTCTTCTTGTAGACTAAGCTTTTGTATATTTTCACTTACGGACGATACAGGGGCATC AACCTCTTCAGCTTCCTTCTGCTCAGAAGCATCATCGTGAGTGTGGTAGGAGTCCATGTTCCTATAAGAGCCGTGGTCATAAAGGGGTTCGGCA GGCACAGGCGCAGGCAAGTCATGCTCATAAAGGGGTTCGTTAGATACAGGCACATCATGGTCATGGTCCTCGATATGATCTTCAGAAGAACTTT CATGTTGTGGCTCAGCCTCGTTGGTCTCGTACCCAACGTGCTGGTTGCTTCTATCAAATGGTAAGTTTGATTGACCAGAATTTAACCCCGAGTC TGCATGAGTGTGCACTAAAGGTTGTGACGGCTCAATAGAGGGCCAATCATTATCAGGAGAAGCATTGTATTCTGGAACATGGTTGTGACTGATA CTCTGTTGAGATGGGTTTGGAGTGGTATAACCCTTATTCTGTGGTCTGCCCATTTTCACAATGTCAGCCATTGACTTTTGACCAGGAGCGCCCA GCCATGCAGATTGGTATCCAGAAGATGGTTGTTGTGGAACTGTTGCAGGAACATCAGCTGCACTGTACGTTGATGCTTTATTTTCATAGCCAAC AGAATCACTGTAAGATGGAGGATTATCCCAATTCGTGTTAGTTGCCGCAGCTCCATAAGATGGTGCAGATGATTGTGTGTAAGAGCTTGTTCCA TAGGAGCTTGTTCCATAAGAACTTGTTCCATTCTCCCTCTTAGGTTTTCCATTATAACCACCAGACTCTGAAAAAGAATGCATTGAATAAGAAC CAGAAGAGTTATACTGTGATGAACCACCACGTCCAGAATAACGATCTGTACCACTTCTGCCACCACGGCTTGAAGTGCTACCACCACCACGAGG CCTGAATTCTGTTGTATCCTTGGACTCCTTTTTCTTTTCTCGTTTGCTCTTCACCTCATGGAAAGGATCTTGAGATAAGAGACGATTAACAGCT TCATTAGGGTCCATATTACACTCCTTTAAAGCAGCATAGATCTCAACATCAGATACACCGTTTACTATCTCTTTTAAACTCTGTACCATCTTTC TTGACCCTGCCGGAATCCCTGCTACGCCGCCGCCGCCTCTGCTTTCCATCAGATCTTTCTAACAAAGCCGCCGCCAATTCAAGATTTTTATTAT TCAAGAAAAAAAAACACACACACAGAGTTGATGAGAAGGGAGCAGCGAGTGGAGAAAGAAGGAAGGAGGAGA |
Primers for UN87096 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TGCTGCTGGTTCTGACTCTG | 60.333 | 20 | CATATGGTGGTTCAACAGCG | 59.988 | 20 | 241 | 406 | 646 |
2 | TGCTGCTGGTTCTGACTCTG | 60.333 | 20 | GCTTCCGGTTACGGTTCATA | 59.96 | 20 | 257 | 406 | 662 |
3 | GGCATAGTTCGAGAACCACC | 59.556 | 20 | GTTTCTTTGAGCGGCTTGAC | 60 | 20 | 242 | 457 | 698 |