Simple sequence repeat (SSR)
| >UN86825 CCTAAAACAAAATAATCACAGTATCACGCATCCTTAAAAGAAAAGAAAGAAAATCTAACGGTGTATATTATAACTTAATTTATAGAAAATAGAC TCTGATCATGAAGCAATGGGAGAAGAATGGCGACAAAACGGGAAATGCCGAATGGCCAAATCTTATAGATCAGTAACTAACATCATACCATTTA TATCCAAAGCAATTAAACTACCGTCAGGCATAAACTATCGTTGCCCACCAGTCATTGTGGCAGCTAGAGCAGCTATAGCCAAAACCGCATTTGC ATAAGAATCTGAGGCCCCAACCTTTGGCTGAAAAAGTACTTGTCATCGGTGCCTTGGGCATGGCAGCTAATGTCCCACTTGGAATGTGGAGAGA ACATACTAAAAAGTTTTTGCCTTCTTGGTTTGCAGCGGTTCATGCAGCTGTGCCATTTATAGCTATGCTTAGGAAGTCACATATCAGAAGAACG GCACTTTTTGTAGCTTGTCAAGTATAAACTCTAGGGTCTTCTTATCTGCCATTCGTTCCATGTCGATATGAATGAACTAAAAAAGAAATTTGTG TGGATTATTTGATAAGAGAAATTTTGTGGATTGTTTAAGACTTAGATGTAAATAACAGAATTAACTACAATTGCTGATATAAATGACATTAGCA AATGAAATTTGTTGCTGACGTCAATCATATTAACTTTCAAAAGAGCGCTAACCGCAGCTCTTGTTTCCCGTCTGATTGAGACCTTCACCCTATA GAAGTAACAAATAAAGTATACCCACATGAAGAGCCCAAAAGATTGATCTTTCGGTGGTCAATTTTATCAAAATAAATAAATAAATAAATAAAGT TTTATCATTGAATTTTAAATGCTAATGCGGAATCATTGAATTTTAAATGATAATGTGCAATTGGTCTCAATCACTGAATTTTAAATGCTAAAGT GGGTTTCTTTGTTAATTCTATAGAAGTATGAATTATATCATTGAATTTTAAACTGACTGACCGGCAGTTGCAGCAACCGCTTTAGCAACCTGCT TTGACCGCATGAACAACCAAAAGGTAATGTCAGCAATAATCACGACGGCCAACTGACATCACCATTTGAATAGGTCGTACGTGTGTCTGTTGCG TGTGGTCACGACAATCACGTTGATCAACACACATTGGGTTGTTAGCACGGTGGCGGTCTAGCAAGTTTATCGGGTTCTGTACATCGTTGTTATA CTATACTGGCCATTGAGAAAATTTGGGCTTCACTAATGGACTACCTATGAGACCACTGATCCATAAACTTGGTATGAAATTGCAACTCATAAAA CAACCTGTCGCTGTACTCAGCAGCCGCGATTGCAAACTGCAAACTGGAAAGGAAAAAAAAATAACATCCTGAAACCGAATTAAGACATAGGGAT AATTTTGTTTATGCGCAT |
Primers for UN86825 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | AGCTCTTGTTTCCCGTCTGA | 59.989 | 20 | TCAATGATTCCGCATTAGCA | 60.179 | 20 | 172 | 714 | 885 |
| 2 | ATACCCACATGAAGAGCCCA | 60.34 | 20 | TCAATGATTCCGCATTAGCA | 60.179 | 20 | 116 | 770 | 885 |
| 3 | GCTAACCGCAGCTCTTGTTT | 59.66 | 20 | TCAATGATTCCGCATTAGCA | 60.179 | 20 | 181 | 705 | 885 |