Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN05048
TCACAGAATCATGATTTACAAAACAAAAACAATCATGGATAACATAAATCCAAAGGGAAAAACCTGAAGAAAAAAAAATCCGACCCGAAAAAGT
ACGTAGTTGTACTAGACTGTGCATACCCTACCCGGGATTTCTGGATCCGCCACTGTTGTGACCTTAAGTGTGTCAGACACCATACTGATATAAG
ACGATACATTTGAGCCAATTCTCCTAAAATGTGCATCTCCATAGCGATCCCCTAATGGGTCAGTCGGGTTTCCACGTTCTGCAGATGGGATACC
ACGATCTGAAGGTGGGTTTCTGCGATCAGCAGATACAGCTCTGCGGTCTGTAGCAGGTGAAGGAGCGGGCCCATTCTCAAACTCCAGAGGTAGT
TTTCTAAAGAAATCTACTGTCAGGTAAGATGACTCCATGTCCACCAATCTGATAACGGTTTTCTTACTTTCCGTACGGAATTTTTCCAATGCTT
CAGTAGCAGCAGCAGCAAGAGTAGCTTGAAGTGATGGAAACCGCCTCAACTCCTTAGTTTCTCCAATTGACTTCCTGACAAGTTCTTTAAGAAC
AAAATGCACAGCGTCTACGGAAGCTTCAGCTGGTCCCCTAAAATAACTCAATGACCCCTCAATAAGGCGTCGATAACCTTGTTCTGGAGCAATC
AAATGAGGCTGATATCCATCTGACTCTGAAACAATTTTCTTCACATTTGGCAGGGAAAGATGCCTATCAAACGGAAGTTTTCTCAAAGCAGCAG
GAAGCTGGTTGTCAAAGACTCCATAAATTCGGTCACCTCCAGCCCGCCCTCCATCTAGATGCTCTTTGAATATCTTGTCAAAAGCACGACAGAG
TTCCAAAATGGTGTACAATTTAGCCCCTTCATCAACTGCAATTGGCCTCCCAAGACGATCCAACTCTGCTTCCATTTCTTCAATACCTTTGTTT
ATTAAGGCAATGATACCTGGTATTTTGGCTTTGATTACAGATTCCAGATGCTGGGAGAGAAGTTTTGCGAGATATACAGAACCCATTTTACTAG
CCAAGTGTCCATAGTCAGGACTGGTATAAAAGTACTCCTCCTCCCTCCGCCTTGCATACATCATATCAGTATTTTTCATAATATCAGCTTGAGA
TCTATTCACAATCCCCACCCATGGATGTTGCAGTCGATAAGCTCTGCCTTCAAGGACATCTAATGCGTTAGTTCCTTTGTCCATCAGATCAAGC
TTGGTCAGCACACCAAAGGTCCTTTCACCTGTTGGATCCACCTCCTTAGCAAGTTTAATAGCATCCGATGTTGCAATATCTTGGTTGGCAGGTG
ATATTGCTAGTATTATAGAGTTGGGCTTCTCAACATAAGCTCGAACCATCTTTTCTATGTCTTCCACAATGGTTTCAGGTTGTCCCTCAACAGC
AACTTTTGTCAGTCCAGGTAGATCGATTAAAGTTAAGTTGACAACTCTAGGGGAATATATGCTGAGATGAATTGGAATTGGAGATATTTGTTTT
GACTTCCCAGTGATTCTGTCTGTTTCATCTTGAATCTCCTGACGTACCAAAGAGAAATCAGTAAACCGCCTCCGTTGCAGATGCCCAAATTCAG
CATACTCTTCTCCGCCATCCGTCTTATGCAACTGCAACACCAATGGTCGCCTTGTGACAATCCCAGATCCTCTAGGAAGAAAATCTCTCCCGAC
AATGCTCTCTAAAACCGAAGACTTCCCAGAACTCTGACCGCCAACAACGGCAACAGAAGGAAGAGCGTCCCAAAGAGAGGAAAAAGTAGAGTCA
TCGCCGCCGTGATCACCTAAAGCCGTACAAGCTCTTTGTATACGGTTTACTAATCCGATCAAGCTCTCCATGGTCGCCATAACTAATTCTTTTA
AGATCTGTACGTATATGTGTTGTTATGGAGGGGATTGTAGAGAGAGAAAATCGTTGGATTCTAGAGAGAGAGAGAATGAAGAGTGTTTGAATTG
AATTGGTCGTCGA

Primers for UN05048 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GCAACAGAAGGAAGAGCGTC 60.14220GACGACCAATTCAATTCAAACA 59.84522244 17421985
2ACAACGGCAACAGAAGGAAG 60.29120GACGACCAATTCAATTCAAACA 59.84522250 17361985
3CTCTCCATGGTCGCCATAAC 60.48320GACGACCAATTCAATTCAAACA 59.84522136 18501985