Simple sequence repeat (SSR)
| >UN86819 CCTAAAACAAAATAATCACAGTATCACGCATCCTTAAAAGAAAAGAAAGAAAATCTAACGGTGTATATTATAACTTAATTTATAGAAAATAGAC TCTGATCATGAAGCAATGGGAGAAGAATGGCGACAAAACGGGAAATGCCGAATGGCCAAATCTTATAGATCAGTAACTAACATCATACCATTTA TATCCAAAGCAATTAAACTACCGTCAGGCATAAACTATCGTTGCCCACCAGTCATTGTGGCAGCTAGAGCAGCTATAGCCAAAACCGCATTTGC ATAAGAATCTGAGGCCCCAACCTTTGGCTGAAAAAGTACTTGTCATCGGTGCCTTGGGCATGGCAGCTAATGTCCCACTTGGAATGTGGAGAGA ACATACTAAAAAGTTTTTGCCTTCTTGGTTTGCAGCGGTTCATGCAGCTGTGCCATTTATAGCTATGCTTAGGAAGTCACATATCAGAAGAACG GCACTCTGCATTAACAAAACCACATGTCAAAAACAGATGTAGCAATAAAGCAGAGAAGCAGTTTTAGATGTTTGGATGGGTCTGCATATTTGCT TATTTTAAACAGATAAGCGCTTATAATAAGCCTTTCAAACACCCCGTATCCTTCAAAGTTAACTACCACCCTTTTGCAAGCTTTTTCTTCATAG TAGCAAACTCCATCGGACGCTTAATCACATCATAGTAATCAGGAAGCTTATTCGAATAACAATACCAAACTTCAATTCTCAAATGTGCATGAAA TTAACACCAAGTGTCGACGACAACCTAATATTACCTCATCAAGAACAATAGGCTGCGCATAACTCCATAAATATCTTTTTTTTGTAGCTTGTCA AGTATAAACTCTAGGGTCTTCTTATCTGCCATTCGTTCCATGTCGATATGAATGAACTAAAAAAGAAATTTGTGTGGATTATTTGATAAGAGAA ATTTTGTGGATTGTTTAAGACTTAGATGTAAATAACAGAATTAACTACAATTGCTGATATAAATGACATTAGCAAATGAAATTTGTTGCTGACG TCAATCATATTAACTTTCAAAAGAGCGCTAACCGCAGCTCTTGTTTCCCGTCTGATTGAGACCTTCACCCTATAGAAGTAACAAATAAAGTATA CCCACATGAAGAGCCCAAAAGATTGATCTTTCGGTGGTCAATTTTATCAAAATAAATAAATAAATAAATAAAGTTTTATCATTGAATTTTAAAT GCTAATGCGGAATCATTGAATTTTAAATGATAATGTGCAATTGGTCTCAATCACTGAATTTTAAATGCTAAAGTGGGTTTCTTTGTTAATTCTA TAGAAGTATGAATTATATCATTGAATTTTAAACTGACTGACCGGCAGTTGCAGCAACCGCTTTAGCAACCTGCTTTGACCGCATGAACAACCAA AAGGTAATGTCAGCAATAATCACGACGGCCAACTGACATCACCATTTGAATAGGTCGTACGTGTGTCTGTTGCGTGTGGTCACGACAATCACGT TGATCAACACACATTGGGTTGTTAGCACGGTGGCGGTCTAGCAAGTTTATCGGGTTCTGTACATCGTTGTTATACTATACTGGCCATTGAGAAA ATTTGGGCTTCACTAATGGACTACCTATGAGACCACTGATCCATAAACTGAAACATCGAAAGATGAAAACTAATATCTCCAAAAAAAAA |
Primers for UN86819 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | AGCTCTTGTTTCCCGTCTGA | 59.989 | 20 | TCAATGATTCCGCATTAGCA | 60.179 | 20 | 172 | 1070 | 1241 |
| 2 | ATACCCACATGAAGAGCCCA | 60.34 | 20 | TCAATGATTCCGCATTAGCA | 60.179 | 20 | 116 | 1126 | 1241 |
| 3 | GCTAACCGCAGCTCTTGTTT | 59.66 | 20 | TCAATGATTCCGCATTAGCA | 60.179 | 20 | 181 | 1061 | 1241 |