Simple sequence repeat (SSR)
>UN86411 TGGACTGAAGGGGTCCCCTCTGAGTAAACAACTGATTGTTTGTCGCTTGACCAAACAACGGTTGTAGAAACGACATCTGCGGCGCCTGTGTCGC AGACCCAAATCCTGCCGAAATACCATCTCCACCACCACCATTACCCCATGTCACCATTCTTTGAAACCCACCAGAACCAGTCTGGTGGTGGGCG TGGTGGGCCTGATGGGTCGGGTTGTTGTCCTCACACCAACCCGACCCATCAAAGAACATATTATTATTAGTCCCACTACTATTCCCATTCCCAT TCCCACTCCCACTATTGTGACTATGGCCATGGTGGTTATGCATAATAGGATCTTGAAATGATTGAAGTGACAACCTAAGATCTTGACTCTGATT AAACTGATGCATATCCGCACTAGAAGTATTATTCGGCCCATTCGAAGAAGCACCCATAGGAAAAAAAGACTTAATAGTATCAGCAATGGAATCT TGGTCAAGTGAAGGAGGCAAAAAGCTTTCATTACCATTTTCATCACCTGGGTACTCTTGAATTCCAATTCCCTGATCTGGGTCTTGCTCGAAAT TCAAATTCGATGTCGAAATCTCGTTTCTTGAACCATTACTAGGTTTCCAAGCTGGCAGCTGAGCAAGTTCATCAATGGCAGTTTTAGCTTTTTT AATAAGCCAGTCAACTGCTTTACTAGGTCTATCATAACCTAAACGGTCTTGTACATCATAGAATTGTATAGCAGTATGTGCTGATAAACGCACG CGCCTGTCGCGTGGGCCTTTTGCTGTACAAACTTTACTATGTCTGTCTTTCCGACCAGTTGACCGGACAATGTGACCACCTTGTACTTGGACTA TTTCTCCACCTGTGTTTGATGTTCTTAAGGCTAATCTTGATGACCCTTGTTGTTGTTGTTGTTGATGTTGCTGATGTTGTTGTGCTAGCATGAC CATGTTCCTTCTAGCCATAAGTAGCTCGGCACGTTGAGCATCGATGTTGTTTTGTTGAGCAAAATGTGGACCAAAAAGACCATGAATGTTTGGT TGTTGTGGGGTGTTTGTGATGATGGTGGGGTCCACAATGTTCATGTTTTTGTTGTATGACTGAGCCACTACTCTTGCTGG |
Primers for UN86411 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GTCTTTCCGACCAGTTGACC | 59.555 | 20 | ACCCCACAACAACCAAACAT | 59.989 | 20 | 249 | 797 | 1045 |
2 | GGGCCTTTTGCTGTACAAAC | 59.615 | 20 | TTTGGTCCACATTTTGCTCA | 60.088 | 20 | 251 | 765 | 1015 |
3 | GTCTTTCCGACCAGTTGACC | 59.555 | 20 | TTTGGTCCACATTTTGCTCA | 60.088 | 20 | 219 | 797 | 1015 |