Simple sequence repeat (SSR)
| >UN85227 TGATCGAAAATCATGAACTTTGCTTAACATGATAAACAAATTACTGAAAGTCATATGACTAAAATATCAAACCATCAAATGTTTTTGCCAACCC GTTCAAAATCCAAATCAGAGTCATAAATAAAATCTTTTCAAGAAAATAAAACTAAAGTCTGAACAATCTTGTCTATGTCTCTCGAGTTCATGAA GTTCAGTTACTCGACCTCAAAGGGTTAGGACAAAAGGCGGTGCATCTTTCCGTGGTCCAGCAACAGTTCGGTAGACATAAACCTTATTAGCAAG AATATCATCACCATCTTCTTCTTTGATCACTTCAACGTTTAACATAGCCTTCTCTTCAGCCAACTTCTTACACCCGTTCATTGTCAAATTACAG GCCGACATCCATAAGGATCGCATTGACTCATATTGATTCAAACCCGAAAGCAAAGCTGAGTCACCAAAAGGACAGTCTCGTATTTCCAACCTCT TCAGTTTTGGGCAGCCTCTCATCACATACTCCATACCCGCATCACTACTGCCTGCAAAAGCTACCGAGAGTGTCTCAAGGTTTTTAGCATACTT CCCAATATACTCAAAAGCAAGGTCGGTTAGTAGGCCTGAAACCGAGAGCCTTTGAAGGTTGACACATGTTTTGACAATTGCACCAAAGGCTTCA TCCATTGGTTCTTTGGTTAGGTAATCTGGTTCATGAGGTTTCATTATGCAGAGACGGAAGTGAGTGAAATCTGGGCAGTTTTGGGCAACGGCAA CTATAGCAGCGTTTGTCATTCGGTGGCAGAAGTAGAGTATGTAATGGAGCTTTGGGCAGCCGTTAGAAACTGCTACGAGACCGGCCTCGGACAC ACCACTTTGTTGGTCAAAAGGGTCGTCTGGGTAGACTCGAAGTTCCTCTAGCAATGGACAGTGTGATCCAACTGCTTCTAAACCCTTGTCCCCA ACTGTATCAAGGACCCAGAGACGAGTTAGCCGTTTGCAGCGAGTAACAATCTGTTCAAGTTCATCAGCTCCAAGGACCGAATAACTCAGGTTCA AGAAGGTCAAACCACCACAAACAGGATAGACAGCAGGTATATAAACCAACGAAGGATCCCAAAACCCGGAAAGTGTGTGTAAATTTCCACATTT ACTGAAAGCACTTTCCAGCTCGTTGACTGTACTAGACACGAGGTCTTCCGAGAAAGTACCAGTACCAAGCTCAGTTAACTGTGGAGCCAGCACA AGAAGCTTTCGCAATTGATCCAAACTTACTTTTTGATTGACTTTTAAGACTCGTAATGATTTGGATCGAGAAACAAGACTCTCCAAAACATCGA AACTGACTTCGTTGCCCAAGTTTGCAAAGTTAAGAACTTCTAACGAGGTTAAGTTTTCTGGGAAGAAACTTAACCAATCTCCACCGACATCAGC AACTCCGTTCTCTTGTATGTCTAATTCTGTCAAGTTTTTGCAATGAGTAGCAATAGCTTCCAACCCAATAGTACTAAACCCATCACAGCTCATT AGCGACAGATTTCTAAAGCCAATAAAATTCGTCGCTAAAAACTCCAAACTTTGGTCACTAACAACCATCCTCTTCAATCTCAACTCCTCTAAAA AGGGATAAACCGTGGCGAAAACACTCAACCATGGAAACACATCAGCACCCCAATCATCAGGCACAAGGTTAAAATCACTAAACCTAGGTTTCCC TTTAATAGTGACACTTCTTATATTGGGAAACCTTTTAGCGACGATTTGTGGTGAGACTGAGTAACAGTTACCGATGAAGACGTGGCGTCTGCTC CATCGTTCAGCGTTGTACCATGATTTGGAAACGAGTGAGATTGAGCTGCGGTCTTTGTGGGTTGTTATTAGTGACAGTACTCGTTCGAGAACTT CGTCGGGAAAGAGTGAGTCAACTCGTTTTTTATTTGGATCCATGAGCTTCAAAGGAGGAGTTGATTTACATGATGATGATGATGATGTGTTGTC TTTTATTTCTCTCTCTAACCAAATGGAAGAATGGAAAGTGGC |
Primers for UN85227 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CTTCGTCGGGAAAGAGTGAG | 59.982 | 20 | GCCACTTTCCATTCTTCCAT | 58.984 | 20 | 139 | 1878 | 2016 |
| 2 | TTCGTCGGGAAAGAGTGAGT | 59.844 | 20 | GCCACTTTCCATTCTTCCAT | 58.984 | 20 | 138 | 1879 | 2016 |
| 3 | ACTTCGTCGGGAAAGAGTGA | 59.844 | 20 | GCCACTTTCCATTCTTCCAT | 58.984 | 20 | 140 | 1877 | 2016 |