Simple sequence repeat (SSR)
| >UN85215 TTTTTTTCCGCAAATGTTTAAAACCAATTATTTTCGTTTCTTGTTTAATGTCATCAGGAACGTGACAAGATACAAAACGAAATTTAACCGATTT ATCAGAAGTATCATTCACCTTATTTAGCAGTACTAAACATTAAGTATTTGATCATATAAAGACCAAAGAAGCCTTAATACTAGTAGTCTTATAC TTATTCATTTACTCAAAGAATATAGATATATGGTACTAGCCCATGGTGTAAGTTGGGGTTGGTAAGTTGATCACTGTGCTCTTGATTTTCGTCA TCATATTAATACTGTTCGTGATCCCTTGGGATCCGATTCCGCTGTCCTTCAATCCCTGAAAAGGGAAATGATCAGGGCCACGAGCGGGTGCTGA GTTAATCTGGACAGTTCCTGTTTCCATCGCGTCACTAATTAAAATCGCTTTGTTGATGTCGTTAGTGAAGACACATCCCTGAAGGCCAAAATTG CTGGCATTGCAATGGTGGATCCCTTCTTCGATTGAGTTGATCCTGATAACCGGCACAATGGGCCCAAACGGCTCCTCCCAAGCGATTCTCATGT CAGGCCGGACATTATCAAGCAACAATGGCCATATGAGGTTGCCCTCTCTCTTGTACTCTTGACAAAAGGTTGCCCCTTTTGTCTTTGCATCCTT AGCCAACCCCTCAATGAAATTAGCTGAAGACTCAGATACAACTGGGGTGATGTCACAGTTGTCCTCGGGTGGTCCTACCTTCAACTTTGCCAGC TTGGCATTTACTTTTTCGACTAGTGCATCAGCAACAGATTCCATTACCAACACAACCTTAACAGCTGTGCATCTCTGCCCACTATAAGAAAAAC CTCCTTTGATGATATTTGCCGCTACTAAATCAAGATCAGCATCCTCAAGCACAATGCAAGCATCTTTTCCTCCAAGCTCCATCTGAAGTGGCAC CATGCCGGCTTTCTTGGAGATTGCGACTCCAGTGTCACCACCCGTAAAGCTGATACAGTTAACTCCAGGATGCATAGTTAGGAAATCTCCGATT TCTGATCCTTTTCCAGTCACGCAGCTGATTAATCCTTTAGGAAAGCCTGCCAAGTGAAAGCATTGCACCATATGTAGGCAAGCCACTGCACCCT GAGTTGGAGGCTTGAGGACAAGGGAGTTTCCAGCGATAAGTGCAGGACCAATTTTAGAAACAGCAAGGTTGACTGGATAGTTGAAGGGAGGTAT GGCCAAGACAACTCCAAGCGGAATCTTTGAAGTGAGGCAGTATTTAGTCCTCTCATTGCCTGGAAAACTGTCGGAAACCAAGAACTTGCCTTCT CCTAGAATCCTAACCCCTTCTTCAGCACAATATGATATAAGATCTCCTGATCGAACGACCTCAGTGACCGAATCCTTGGCTGGTTTCGCAATTT CCTTGACTAGGCATTCGGCAATGGGGGCCTTGTGCTCTTTCAGAATAGCTGCGGCCTTGTGAAGAAGCTCGGCTCGCTTCCATAAAGGTGTTTT TGCCCATTGCTTTTGAGCGATTTTTGCGGACTCCATCACTTTGTTGACTTCTTCTTGTGTACATGCTTGAACCTTGTACTGAGTGGTTCTAGTA GTTGGATTAATAATAGCAACAGATTTGCCAGAAGCAGATTTTTTCCATTCACCTTCAGTGTAATATTTGAAAACTTCTCCATCAATTATGTCTT CAAACACACCAGTTCCTGCCATTGATATGCTTTTTTATCTATCTATCTATCTACTAACCTTATCTTCTTAACTATGTGTGTGTGTGAGATAAAG GGTGAGTGAGTGAATATGAGTGAAGGAAAGAATGAATGGTGTATGGTTTTCTTGATGTGTTGTTGTGTATAAATATTGGAGGAAGGTGAGCCAC ACTTGGT |
Primers for UN85215 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CAACAGATTTGCCAGAAGCA | 59.988 | 20 | CAAGTGTGGCTCACCTTCCT | 60.298 | 20 | 271 | 1615 | 1885 |
| 2 | TCAAACACACCAGTTCCTGC | 59.726 | 20 | CAAGTGTGGCTCACCTTCCT | 60.298 | 20 | 194 | 1692 | 1885 |
| 3 | CAACAGATTTGCCAGAAGCA | 59.988 | 20 | TGGCTCACCTTCCTCCAATA | 60.594 | 20 | 265 | 1615 | 1879 |